Selenomonas sp. TAMA-11512: TAMA11512_23510
Help
Entry
TAMA11512_23510 CDS
T10655
Symbol
yagF
Name
(GenBank) xylonate dehydratase YagF
KO
K22396
xylonate dehydratase [EC:
4.2.1.82
]
Organism
selm Selenomonas sp. TAMA-11512
Pathway
selm00040
Pentose and glucuronate interconversions
selm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TAMA11512_23510 (yagF)
Enzymes [BR:
selm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.82 xylonate dehydratase
TAMA11512_23510 (yagF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
BEU88887
LinkDB
All DBs
Position
2484482..2486461
Genome browser
AA seq
659 aa
AA seq
DB search
MSVQKLFENENPAHYQVDTHADGPKGVLPLSRDELATLPSGNIFGMTINAGMGWEASALS
GDDVMLIGTNGGLRRDNGDTVAVGLHPGHFELDALMKRAAETLREEGCVPHAGFVTDPCD
GRTQGTIGMFDSLPYRNDASIVMGRIIRSLPTRKAVIGIASCDKGLPAMMMALAAQHHTA
TILIPGGATLMPTKGEDLAKIQTIGVRYANGELSYEDAVSLGCKACASGGGGCQFLGTAG
TSQVVGEGLGLTLPHAALAPSGEAIWYDMAANSARAVIDLYKSGICTKDILTDKSIENAM
VIHAAFGGSTNLLLHVPAIAHAAGLKRPSVHDWARINKIVPRLVSVLPIGPINYPTVDVF
MAGGVPEVMLHLRRLGLLHEDVLTVTGSTLGENLDWWENSNRRAALEKRLKEIDGLNRND
LIFSPDEAKAKGIGSTVTFPVGNIAPEGSVVKATAIDPSVIDDDHVFRHTAKCKVFASEK
DAMSALKHNGIEAGDIMIVMGGGPLGTGLEETYQITAALKHLSFGKHVSLITDARFSGIS
TGACFGHVGPEALADGPIGKLETGDVIEIIVDTNKLEGSLNFIGKEGSPVSYEEGARILA
ARKTNPNVHPDDDLPDDTRLWAALQNVSGGTWQGTVYDVDRIIKVLDAGKKALEESGEY
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttcagaagctgtttgaaaacgaaaatcccgcgcactatcaggtcgacacacac
gcggatggacccaaaggcgtattgccgctgagccgggatgagctggcgacactccccagc
ggcaatatcttcggcatgacgatcaatgccggcatgggctgggaagcatccgccctgagc
ggcgatgatgtcatgctcatcggcaccaacggaggcttgcgcagggacaacggcgatacc
gtcgctgtcggtctgcatcctggccattttgagctggatgccttgatgaagcgggccgcc
gagacgctcagggaagagggctgtgttccgcatgcgggctttgtcacggatccttgcgac
gggcgcacgcagggaaccatcggcatgtttgattcccttccttaccgcaacgacgcttcc
atcgtcatgggccgcatcatccgctccctgccgacgcgaaaagcggtcatcggcatcgcc
agctgcgataagggtctgccggccatgatgatggcactcgcggcccagcatcatacggcg
accatcctgattccgggcggcgctacgctcatgccgacaaagggcgaggatctcgccaag
atacagacgatcggcgtccgctatgccaacggcgagctgtcgtatgaggatgccgtgtcc
ctgggctgtaaggcgtgcgccagcggcggcggcggctgtcagttcctgggcacggccggc
acctctcaggtcgtcggcgaagggctcggcctgaccctgccccatgccgcgctcgcaccg
tccggagaggcaatctggtacgacatggcggcgaattccgcccgcgccgtcatcgatctg
tacaaaagcggcatctgtacaaaggatatcctgacggataagtccatcgaaaatgcgatg
gtcattcacgcggcattcggcggctccacgaacctcctcctccacgttcccgccatcgcc
catgcggccggtctgaagcgtccgtccgttcatgactgggcacgcatcaacaagatcgtc
ccgcgtctcgtcagcgttcttccgatcggtccgatcaactatccgaccgtagacgtcttc
atggccggaggcgtgcccgaggtcatgctgcacctgcgcaggctgggcctgctgcatgaa
gatgtcctgacggtcaccggctccacgctcggtgaaaatctcgattggtgggagaactcc
aatcgccgcgccgcgcttgaaaaacgcctcaaggaaatcgacggactcaatcgaaacgac
ctcatcttcagcccggatgaagcaaaggcgaaaggcatcggatccaccgtcaccttcccc
gtcggcaacatcgccccggagggctccgtcgtcaaagcgaccgcaatcgatccctccgtg
atcgacgatgatcacgtcttccgccacacggcgaagtgcaaggtcttcgcctcggaaaag
gatgccatgtccgccctaaagcacaacggcatcgaagccggcgatatcatgatcgtcatg
ggaggcggtccgctcggcacgggtctcgaggaaacgtatcagatcaccgccgcgctgaag
catctctccttcggcaagcacgtctccttgatcacggatgcacgcttctccggcatatcg
acaggagcctgcttcgggcacgtcggtccggaggctttggcagacggtccgatcggaaag
ctcgagacgggcgatgtcatcgagatcattgtcgatacgaacaagctcgagggcagtctg
aacttcatcggcaaggaaggcagtcccgtcagctatgaagagggcgcgcgcatacttgcc
gcccgcaaaacaaacccgaacgttcatccggatgacgatctaccggacgatacgcgcctg
tgggccgctctgcaaaacgtcagcggcggcacctggcagggcaccgtctacgatgtggac
cgcatcatcaaggtgcttgacgcgggcaagaaggcgctcgaggaaagcggcgaatactga
DBGET
integrated database retrieval system
