Selenomonas sp. oral taxon 136: AXE86_00605
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Entry
AXE86_00605 CDS
T04745
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
selo
Selenomonas sp. oral taxon 136
Brite
KEGG Orthology (KO) [BR:
selo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
selo03032
]
AXE86_00605
03400 DNA repair and recombination proteins [BR:
selo03400
]
AXE86_00605
Enzymes [BR:
selo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AXE86_00605
DNA replication proteins [BR:
selo03032
]
Prokaryotic type
DNA Topoisomerases
AXE86_00605
DNA repair and recombination proteins [BR:
selo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AXE86_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_PaaD
Toprim_4
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
AME02706
UniProt:
A0A0X8K8X7
LinkDB
All DBs
Position
complement(122648..124936)
Genome browser
AA seq
762 aa
AA seq
DB search
MATQASARKAKAGTAKKTKTAKTAGKKPQKKILVIVESPAKAKTIERHLGKQYTVRASMG
HLRDLPKSQFGIDVEHNFEPKYINVRGKGDLIRALKKEAKDADKIYLASDPDREGEAIAW
HLAHILGVDPATDCRIVFHEITKPAIEEAVHHPRPIHMAQVDAQQARRMLDRIVGYQLSP
LLWRKVRKGLSAGRVQSVTVRLICDREREIEAFQSEEYWTVEAKLKKDKHAFIAEVTHAH
GKKLALHSEAETKALTDDLAQQKFSVQEVKRSERRKKAAPPFTTSSLQQDAARKLGFTSG
RTMMIAQQLYEGIVLGRHGATGLITYMRTDSTRISNLAVDEARSFLSEEYGKEYVPSRPN
VYAMGKKAQDAHEAIRPTSILRTPAEVENYLNRDQLRLYTLIWQRFAASQMSAAVYDTIA
AQIAAGDYRLRAHGSKLKFKGYTAVYVGAETAKKEKDTLLPDLMDGDPLTLGALNPEQHF
TEPPPRYNDASIVKTLEELGIGRPSTYAPIIETIQKRGYVERREKQFRPTELGFIVTDML
EEHFKNIVDVKFTANLEGELDGVADGTLDKNELLGSFYKPFEQTLKKAEDAIGTVELPEE
VTDISCDKCGRMMVVKQGRFGKFLACPGFPECRNAKPLLRDTGVACPKCGGRIVERKSRR
GRTFFGCDRYPECDYTTWDEPQKETCRTCGAFMQKHRYRTGRAILYCSNEACPSRIGSPI
EKELARQKKRAQEALEKTKETDAAAKEPATKRKTSARKGTRS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
ttggcgacgcaagcatctgcccgcaaggcgaaagccggcacagcgaagaaaacgaagaca
gcgaaaacggcagggaaaaaaccacagaaaaaaattctggtgattgtggagtctcctgca
aaggcaaagaccatcgagcggcaccttggcaaacagtataccgttcgtgcgtcgatggga
catctgcgcgatctgccgaaaagtcagttcggcattgatgtggaacataactttgagccg
aaatacatcaatgtgcgcggcaagggggacctgatccgtgcgctcaaaaaagaggcaaag
gatgccgataaaatctatctggcaagcgatcctgaccgcgagggggaagcaatcgcttgg
catttggcacacattctcggcgttgaccctgcgacggactgccgcatcgtctttcacgag
attacgaagcccgcgattgaggaggctgtgcatcatccgcgtcccattcacatggcgcag
gtcgatgcccagcaggcacgacgcatgctggaccgcattgtcggctatcagctctcaccg
ctcctctggcgcaaggtgcgcaaggggctttctgccggacgcgtccagtcggtcacggta
cgcctgatctgcgatcgtgagcgcgagatcgaggcctttcagtccgaggagtactggacg
gtcgaggcgaagctgaaaaaggataagcacgcctttatcgccgaggtgacccatgcgcac
ggcaagaaactcgccctgcacagcgaggcagagacgaaggcactgacggatgatctggca
cagcagaaattttccgtgcaggaggtcaagcgcagtgagcgcaggaagaaagctgcaccg
ccctttacgaccagttccctgcagcaggatgcggcgcgcaagcttggatttacgtcggga
cgcacgatgatgatcgcccagcagctctatgagggcatcgttctggggcgtcacggtgcg
accggtcttatcacctatatgcgtaccgactcgacgcgcatttcaaatctcgccgtggat
gaggcccgcagttttctcagtgaggagtacggaaaggagtatgttccatctcgtcccaat
gtctacgcgatggggaagaaggcgcaggacgcacatgaggcaatccgtccgacgagtatc
ctgcgtacgcccgcagaggtggaaaactacctgaaccgcgatcagctccgtctctatacg
ctcatctggcagcggttcgccgccagtcagatgtctgccgccgtttacgacaccatcgcg
gcacagattgcagcaggggactatcgtctccgcgcgcatggatcaaagctgaagttcaag
ggctataccgctgtctatgtcggggcggaaacagcaaagaaggagaaggacacgctcctg
cccgaccttatggatggtgatcctctgacgctgggggcgttgaatcccgagcagcacttt
accgagccgccgccgcgctacaacgacgcgtcgatcgtcaagaccctcgaggaactgggg
attgggcgtccgagcacgtacgcgcccatcatcgagaccatccagaagcgcggctacgtg
gagcggcgggaaaagcagttccgtccgacggagctgggctttatcgtcacggatatgctc
gaggagcatttcaagaacattgtcgatgtcaagttcacggcgaatctggagggagaactc
gacggtgtcgccgatgggacgctcgacaagaatgagctgctcggcagcttttacaaaccg
tttgaacagacgctgaaaaaggcggaggatgccatcggtacggtggaactccccgaggag
gtcaccgatatctcctgcgataagtgtggccgcatgatggtcgtcaaacaggggcgtttt
ggcaagttccttgcgtgtcccggcttccctgagtgccgcaacgcaaagccgctcctgcgc
gacacgggtgtcgcgtgtcccaagtgcggcgggcggatcgtcgagcgaaagagccgccgc
gggcgcacattcttcggatgcgaccgctatcccgaatgtgactatacaacgtgggatgag
ccccagaaggagacctgcaggacctgcggtgcctttatgcagaagcatcgctaccgtacg
gggcgcgccattctctactgcagcaacgaggcatgcccttcgcgtattggcagccccatc
gaaaaggaactggcgcgccagaaaaagcgtgcacaggaagcccttgaaaagacgaaggag
actgatgctgcggcaaaggagccggcaacgaaacgaaagacaagtgcgcgtaaggggaca
cgctcgtga
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