Selenomonas sp. oral taxon 136: AXE86_02020
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Entry
AXE86_02020 CDS
T04745
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
selo
Selenomonas sp. oral taxon 136
Brite
KEGG Orthology (KO) [BR:
selo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
selo03016
]
AXE86_02020
Enzymes [BR:
selo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AXE86_02020
Transfer RNA biogenesis [BR:
selo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AXE86_02020
Prokaryotic type
AXE86_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AME02962
LinkDB
All DBs
Position
complement(445373..446245)
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AA seq
290 aa
AA seq
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MDGFINVLKPTGMSSHDVIDVVRRIFHQKRVGHAGTLDPAAAGILPIALGRAARLVEYLE
GADKSYRAEIAFGYATDTGDVYGTVTERAEHPVLPSAEEIEAVLARFRGCITQRPPAYSA
IKVGGKRAADLVRQGRAVDIPTRKVTIHRLELLHIDAVRQRIRIDVDCSKGTYIRSLCAD
IGAGLHLPATMRFLLRSRVGAFTLADAYTPEELAEAGEDAVCAADRALSLPCYELAQQRV
KAFYSGLSTTERRPLTAGLYRVYADGVFLGIGRYDANAQEMYPEKAFPPV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtggatggattcatcaatgtactgaagccgacggggatgtcctcgcacgatgtcatcgat
gtcgtgcggcgcatctttcaccagaaacgtgtcggtcatgcggggacgctcgatcccgcg
gcggctgggattctccccattgcccttgggcgcgctgcacggctcgtggagtaccttgag
ggggcggataagtcctaccgtgccgagatcgcctttggctatgcgacggacacaggggat
gtctacgggacggtaacggagcgtgcagagcaccccgttctgccgtcggcggaggagatt
gaggcggtgctcgcacgctttcgcgggtgcatcacgcagcgcccgcccgcctactcagca
atcaaggtcggcgggaagcgtgccgccgatcttgtgcggcagggacgagcagtggatatc
ccgacgcgcaaggtcactattcaccgattggagctcctgcacatcgatgccgtgcggcag
cgcatccgcatcgacgtggactgctccaaggggacctatatccggtccctctgcgccgac
atcggtgcgggactgcatctgcccgcgacgatgcgcttccttctgcgcagccgcgtcggt
gcgtttaccctcgcggatgcctatacgcccgaggaactcgcggaggcgggggaggatgcg
gtctgcgcggcagaccgcgccctctcgctcccctgctacgagctggcccagcagcgtgtc
aaggcgttctacagcgggctctcaaccacggaacggcgccctctcactgcagggctttat
cgtgtctatgcggacggcgtttttctcggtatcggacgctatgatgccaatgcacaggag
atgtacccagagaaggcgtttccgccggtttga
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