KEGG   Selenomonas sp. oral taxon 136: AXE86_02230
Entry
AXE86_02230       CDS       T04745                                 
Name
(GenBank) RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
selo  Selenomonas sp. oral taxon 136
Pathway
selo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:selo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AXE86_02230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:selo03019]
    AXE86_02230
   03009 Ribosome biogenesis [BR:selo03009]
    AXE86_02230
Enzymes [BR:selo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AXE86_02230
Messenger RNA biogenesis [BR:selo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AXE86_02230
Ribosome biogenesis [BR:selo03009]
 Prokaryotic type
  rRNA helicases
   AXE86_02230
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Flagellin_IN SecA_DEAD
Other DBs
NCBI-ProteinID: AME02996
UniProt: A0A120KRE9
LinkDB
Position
complement(491848..493113)
AA seq 421 aa
MTHFDQLGISETLTALLQKQGITQPTPVQEQAIPPMRAGRDVIAQAQTGTGKTLAYLLPL
LARIKPQGAAAQALVIAPTRELAIQIERVAEPLAQPLGIGTVVIYGGADIERQKEKLRRS
PQLVIGTPGRLLDHVRRGTLVLGSVNKVVLDEADEMLKMGFIEDVETLLGAAAQDYQLAL
FSATMPERIVRLTKRFMTNPAHIRLAGETVTLAAIEQVVIPVSAGDKLDRLCASINEEAP
YLAMVFCATKERTRALMMELAQRGYLVDALSGDLTQTQRSFVLRQFRSAKLQILCATDIA
ARGLDIEGVTHVYNYDLPPTVTDYIHRIGRTGRAGTQGKAITLVAAHQHEKLRKMEAALK
ERLRRDAVKKKPRPTETTEVQQRVQRGERKRTTPKKIKPRPRSKKSGKTVTNLGHRSRRK
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgacgcatttcgatcagctcggcatctcggagacgctgaccgcactcctccaaaaacag
ggcatcacgcagccgacccccgtgcaggagcaggcgatcccgcccatgcgcgcggggcgt
gacgtgatcgcacaggcgcagacggggacgggcaagacgctcgcctatctcctgccgctc
cttgcgcgcatcaagccgcagggcgcggcggcacaggcactcgtcatcgcaccgacgcgt
gagctcgccatccagatcgagcgcgtcgccgaaccgcttgcccagccccttggtattggc
accgtcgtgatctatggcggggcggatatcgagcggcagaaggaaaagctgcgccgcagt
ccgcagctcgtcatcggtacgccgggacgtctgctcgatcacgtacggcgcggaacgctt
gtgcttggcagtgtgaacaaggtcgtcctcgacgaggcggacgagatgctgaagatgggc
ttcatcgaggatgtggagaccctgctcggtgctgcggcacaggactatcagctcgcactc
ttctcggcaacgatgcccgagcgcattgtgcgcctgaccaagcggttcatgactaacccc
gcgcacattcgtctcgcgggcgagaccgtgacactcgccgccatcgaacaggtcgtcata
cccgtcagtgcaggggacaagctcgaccgcctctgtgcctccatcaacgaggaggcaccg
tatcttgccatggtgttctgcgccacgaaggagcgcacccgtgcgctcatgatggagctc
gcacagcgtggctatctcgtcgatgcgctcagcggcgacctcacgcagacgcagcgcagt
ttcgtcctgcgccagttccgcagtgcaaaactgcagatcctctgcgcgacggacattgcg
gcgcgcggactcgacatcgagggcgtgacccacgtctataactacgacctgccgccgacg
gtgaccgactacatccaccgcatcggccgcacggggcgcgcagggacacagggcaaggcg
atcacacttgtcgcggcgcaccagcatgagaagctgcgcaagatggaagctgcactcaaa
gagcggctgcgtcgtgacgcagtgaaaaagaaaccgcgtccgacggagacgaccgaggtg
cagcagcgggtgcagcgcggtgagcggaagcggacaacgccgaaaaaaataaagcccagg
ccgcgcagcaaaaagtccggcaagactgttacaaatcttggacatcgcagccgcaggaag
cggtga

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