Selenomonas sp. oral taxon 136: AXE86_08710
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Entry
AXE86_08710 CDS
T04745
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
selo
Selenomonas sp. oral taxon 136
Pathway
selo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
selo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXE86_08710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
selo03400
]
AXE86_08710
Enzymes [BR:
selo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AXE86_08710
DNA repair and recombination proteins [BR:
selo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AXE86_08710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AME04148
LinkDB
All DBs
Position
1815814..1816566
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AA seq
250 aa
AA seq
DB search
MRFVSWNVNGLRAALKKGFMEAFKELDADAFCLQETKMQEGQAILDLPGYEQYFYSAEKK
GYSGTAIFTRVKPLSVAYGIGIPEHDHEGRVITMEFDDVYLVTVYTPNAKRALERLDYRM
TWEDAFRAFLLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFTELLNV
GFVDTFRALYPDLTGAYTWWSYLRHARETNAGWRIDYFLVSEELRDRIAAAEIHADVFGS
DHCPVSLTLK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgtatcatggaatgtcaacggcctgcgcgccgcactcaaaaagggatttatg
gaggcgttcaaggagcttgacgccgacgccttctgcctgcaggagacgaagatgcaggag
gggcaagcgatcctcgatctgcccggctacgagcagtatttttacagcgcagagaaaaag
ggctactcgggcacggcgatctttacgcgcgtgaagccgctctccgtggcgtacggcatc
ggcatccccgagcacgatcacgaggggcgcgtcatcacgatggagtttgatgatgtctat
cttgtcaccgtctacacaccgaacgcaaagcgcgcactcgagcgcctcgactatcgcatg
acatgggaggatgcgttccgcgcattcctgctcgatctgcgtgcgaaaaaacctgtcgtc
gtctgcggcgacctcaacgtcgcgcatacggagatcgacctcaagaacccgaagagcaac
cgccgcaacgcgggctttacggacgaggagcgcggcaagttcacggagctgctcaatgtg
ggctttgtcgatacgttccgcgcgctctatcccgacctcacgggggcgtatacgtggtgg
tcgtatctgcgccatgcgcgcgagacgaatgcagggtggcgcatcgactacttcctcgtc
tccgaggagctgcgtgaccgcatcgcggcggcggagatccatgcggatgtattcggaagc
gatcactgccccgtatcactgacactaaagtaa
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