KEGG   Selenomonas sp. oral taxon 920: BCS37_03655
Entry
BCS37_03655       CDS       T04818                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
selt  Selenomonas sp. oral taxon 920
Pathway
selt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:selt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BCS37_03655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:selt03019]
    BCS37_03655
   03009 Ribosome biogenesis [BR:selt03009]
    BCS37_03655
Enzymes [BR:selt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BCS37_03655
Messenger RNA biogenesis [BR:selt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BCS37_03655
Ribosome biogenesis [BR:selt03009]
 Prokaryotic type
  rRNA helicases
   BCS37_03655
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CFAP126 AAA_19
Other DBs
NCBI-ProteinID: AOH47598
LinkDB
Position
787506..788771
AA seq 421 aa
MTRFDQLGVSETLVALLKKQGITAPTPVQEQAIPPMRAGRDVIAQAQTGTGKTLAFLLPL
IEKIKPQGEVAQALVIAPTRELAIQIARVAEPLGTELGIGTIVIYGGADIERQKEKLRRH
PQLIIGTPGRLLDHVRRGTLVLGSVNKIVLDEADEMLKMGFIEDVETLLGRTAQDYQLAL
FSATMPARIVQLTKNFMTTPARIHIEGERTTLENIEQIVISASEGEKIDRLCASINEEAP
YLAMVFCATKERTRSLMMELAHRGYLVDALSGDLTQTQRAFVLRQFRAAKLQILCATDIA
ARGLDIEGVTHVYNYDLPPTVTDYIHRIGRTGRAGARGKAITLVAAHQHEKLRKMEAALK
ERLRRDAVKKKPRPAETTEMQQRVQRDERKRTRPKKIKPRPRSKKSGKTVTNLGHRSRRK
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgacccggttcgatcagctcggtgtctcggagactcttgttgcactgctgaaaaaacag
gggattaccgcgccgaccccagtgcaggagcaggcaattccgcccatgcgcgcgggacgg
gacgtcattgcacaggcacagacaggaacgggtaagacgctggcctttctcctgcctctg
atcgagaagatcaagccgcagggcgaggtcgcgcaggcacttgtcattgcgcccacgcgc
gagcttgcgatccagattgcgcgcgtggccgagccgctcggcacggagcttggcatcgga
actatcgtgatttacggcggtgcagacatcgagcggcaaaaggagaagctgcgccggcat
ccccagctcattatcggcacgccggggcggctgctcgaccatgtgcggcgcgggacactc
gtgcttggcagcgtgaacaagatcgtcctcgatgaggcagacgaaatgcttaagatgggg
ttcatcgaggatgtggagaccctgcttgggcggacggcgcaggactaccagctcgcactc
ttctccgcaaccatgcccgcacgcatcgtgcagctcacgaagaactttatgacaaccccc
gcacgtattcatattgagggcgagcggacaacactcgaaaatattgaacagattgttatt
tccgcgagcgaaggggagaagattgaccgcctctgtgcctccatcaacgaggaggcaccg
tatctcgccatggtgttctgtgcaacgaaggagcgcacgcgcagccttatgatggaactt
gcgcaccgcggctacctcgtcgatgcgctcagcggtgatctcacgcagacacagcgtgcc
tttgtcctgcgtcagttccgcgcggcgaagctgcagattctctgtgccacagacattgcc
gcacgcggacttgacattgagggcgtgacccatgtctataactacgatctgccgccgacc
gtaacggactacattcatcggatcggacgtaccggacgtgcgggagcgcgtggcaaggcg
atcacacttgtcgcggcgcaccagcatgagaagctgcgcaagatggaagctgcactcaaa
gagcggctgcgccgtgacgcagtgaaaaagaaaccgcgtccggcggagacgactgagatg
cagcagcgggtgcagcgcgatgagcggaagcggacaaggccgaaaaaaataaagcccagg
ccgcgcagcaaaaagtccggcaagaccgttacaaatcttggacatcgcagccgcaggaag
cggtga

DBGET integrated database retrieval system