Selenomonas sp. oral taxon 920: BCS37_05290
Help
Entry
BCS37_05290 CDS
T04818
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
selt
Selenomonas sp. oral taxon 920
Pathway
selt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
selt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCS37_05290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
selt03019
]
BCS37_05290
03016 Transfer RNA biogenesis [BR:
selt03016
]
BCS37_05290
Enzymes [BR:
selt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BCS37_05290
Messenger RNA biogenesis [BR:
selt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BCS37_05290
Transfer RNA biogenesis [BR:
selt03016
]
Prokaryotic type
tRNA degradation factors
BCS37_05290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AOH47890
LinkDB
All DBs
Position
1131157..1133226
Genome browser
AA seq
689 aa
AA seq
DB search
MQCFETELGGRKLIVEHGKMAKQANGAVLVRYGDTVVLVTATASSAPREGVDFFPLTVDY
EEKMYAAGKIPGGFIKREGRPSSDAVLCARLIDRPIRPLFPDGFRNDVQIVATVLCVEQD
NPPEIAAMLGASCALTVSDIPFMGPIAGVRVGYVDGAFVINPTEQQRAVSELNLTVAGSY
DAVMMVEAGANELSEEVVLDAILFGHAEIRRLVEFQQTIQSACGKEKQTPAIYTVSEELE
SKVRAYAEDRLDTATRNSDKLMRDADIAAIKAETVEHFIEEYPEAAKEISQILYKIEKGI
VRHMITHEKIRPDGRALDEVRPVSCEVGILPRTHGSGLFTRGQTQVLTVTTLGSIGDEQI
IDGLGPETTKHYLHHYNFPGYSVGEARPMRSPGRREIGHGALAERALFPMIPSIEDFPYT
IRLVSEILESNGSSSMGSVCGSTLSLMCAGVPIKRPVSGVAMGLVRDGDDYSILTDIQGM
EDALGDMDFKVAGTTKGITAIQMDIKIAGITRDILASALAQAKQGRAFILEKMLACIDKP
AAELSPYAPRVEVITIDIDKIRDVIGTGGKVVRKIIDETGVDVDIHEDGNIFITSPNMDA
MDRARKMIEDIVREVEVGEVYTGRVTRFLKFGAFVELLPGKEGLCHISQLAKHRVESVED
VVKIGDQLEVKVIEIDEKGRINVSHKALL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtttcgaaactgaactaggtgggcgcaagcttatcgtagagcatggaaagatg
gcaaagcaggcaaacggagccgtattggttcgctatggtgataccgttgtccttgtgacg
gcgactgcctcgagtgcgccgcgggagggcgttgatttctttcctctcacggtggactac
gaagaaaaaatgtatgctgctgggaagatccctggaggctttatcaagagagaaggacgt
ccgagcagtgatgcagtcctttgcgcacgtctgatcgaccgtcctattcgccctctattt
cccgatggctttcggaatgacgttcaaattgtggcgacggtcttgtgtgttgaacaggat
aatcctccggaaatcgctgcgatgcttggtgcctcgtgtgcactcactgtatccgatatt
ccttttatgggaccgattgcgggcgttcgtgttggctatgtcgatggcgcgttcgttatc
aatcctacggaacagcagcgtgctgtttctgagctgaatctcactgtagctggttcttat
gatgctgtgatgatggtagaagcgggcgctaatgaactttccgaagaagttgtgttggat
gcaattctctttggtcatgccgaaattcgtcgtcttgttgagtttcagcaaacgattcaa
agtgcttgtggcaaggaaaaacagacgcccgccatctatacggtatcggaggaactggag
tctaaggtacgtgcatatgcggaggatcgtctcgacactgctacgcggaacagtgacaag
ctcatgcgtgatgctgatatcgcagcgattaaggcggagacggtcgagcatttcattgag
gagtatccggaagcggcaaaggaaatctcgcagatcctctacaagatcgaaaagggcatt
gtccgtcatatgattacgcacgagaagatccgtccggacggacgtgcgctggacgaggtg
cgccctgtcagctgcgaggttggcatcctgccgcgtacgcacggctcggggctcttcacc
agaggacagacgcaggtgcttaccgtcacgacacttggctccattggagatgagcagatc
attgacggtctgggccctgagacaacgaagcactatctgcatcactataacttcccaggg
tacagcgttggtgaggcacgtccgatgcgcagccctggacggcgtgagattgggcacgga
gcactcgcggagcgtgctctctttccgatgattccatcgattgaggacttcccctatacg
atccgcctcgtctcggagatcctcgaatcgaacggctcgagctcgatggggagtgtctgc
gggagcacgctgtcgcttatgtgtgccggtgttccaatcaagcggcctgtgtccggcgtt
gcgatgggacttgtgcgcgatggtgatgactactccatcctgacggatattcaggggatg
gaggatgcactcggcgatatggacttcaaggtcgccggaacgaccaaggggattacggca
attcagatggacatcaagattgccggaatcacgcgagatattctcgcatccgctttggct
caggcaaagcagggacgcgcgttcatccttgagaagatgcttgcctgcattgacaagccg
gcagcagagctctcaccctatgcaccgcgtgtggaagtcattaccattgacattgataag
attcgcgatgtcattggaacgggcggcaaggttgtccgtaagatcattgatgaaaccggt
gtggatgtcgatattcacgaggatggaaatattttcatcacatctccgaatatggatgcg
atggatcgcgcccgcaagatgatcgaagatattgtgcgcgaggtcgaggtgggagaggtc
tatacggggcgtgttacacgtttcctgaagttcggtgccttcgttgaacttctgcccggc
aaggaagggctttgccacatctcacagctcgcaaaacaccgcgtggaaagtgtcgaggat
gtggtgaagatcggcgaccagcttgaggtcaaggtcattgagattgacgagaaggggcgt
atcaacgtcagccacaaggctcttctctga
DBGET
integrated database retrieval system
