Selenomonas sp. oral taxon 920: BCS37_10255
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Entry
BCS37_10255 CDS
T04818
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
selt
Selenomonas sp. oral taxon 920
Pathway
selt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
selt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCS37_10255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
selt03021
]
BCS37_10255
03400 DNA repair and recombination proteins [BR:
selt03400
]
BCS37_10255
Enzymes [BR:
selt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BCS37_10255
Transcription machinery [BR:
selt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BCS37_10255
DNA repair and recombination proteins [BR:
selt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BCS37_10255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AOH48802
UniProt:
A0A1B3X6F3
LinkDB
All DBs
Position
complement(2144850..2148878)
Genome browser
AA seq
1342 aa
AA seq
DB search
MLDVNNFDSMRIGLASPDKIREWSHGEVKKPETINYRTLKPERDGLFCERIFGPTRDWEC
HCGKYKRIRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDV
SPRSLEKVLYFAYYIVIDPGETDLKKKELLSEREYHDALEKYGNTFRVGMGAEAIKELLE
ELDLEQMSEQLRNDVRTTSGQKKVRAIRRLEVVEAFRKSGNRPAWMIMDVVPVIPPDLRP
MVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDLGAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKE
MALELFKPFVMKKLQADGAAHNIKSAKRMVERARPEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLTEGRALKLHPLACTAYNADFDGDQMAIHLPLSAEAQTEARVLMLAANHIL
APKDGKPIIVPSQDMVLGSYYLTKLKPGAVGEGKVFTGIAEALLAYQEKVLDLQAEIRVQ
VAGYGLVRSSLGRLIFSEILPEELRHYRQDAETGEWSLGVLMNKKELGRLVANCYDHFGA
TKTAEVIDNVKNLGYHYACIAGMTVAVSDVIVPPKKKEIIADTQGQVNKVERQFARGLIT
EDERYKKVVQLWTKATDDVADAMMDNMDPFNPIFMMADSGARGNKQQMRQLAGMRGLMAD
PSGKIIDLPITANFREGLTVSDYFISSHGARKGLADTALRTADSGYLTRRLVDVAQDVIV
REEDCDVSAINLLQVRARLAESAFDALELLVESLMGRLLAAAIYDPETKDVLYPQDTVLD
DEVLETIGERDIREIMVRGSSVSVEGAVSNAMITESITLGEPDAKKRKKARTAIIRELSG
KEVVRDAALDDGTILAAEGAMLTDKMVEAIIDSELHELHIRNNNVRGIEVEAITEGTGVI
ESLADRIVGRVLAEDIVDEATGETIAHINDPVDEALAKRIEGVRKRVSIRSVLTCKSQFG
VCMKCYGRDLANQAEVEIGEAVGIIAAQSIGEPGTQLTMRTFHSGGVAGDDITQGLPRVE
ELFEARKPKHNAIIAENEGVARIDDTGKGMRTVTITPEGGVPREYSVPFGARMAVRDGME
LKVGDKITEGSVNPHDILRVCGLQATQRYLVYEVQKVYKSQGVEINDKHIEVMVRQMLHK
VKIEEAGTTDFLPGEYIEINTFEAANTKAIEEDGEPAVAKPILLGITKASLATDSFLSAA
SFQETTRVLTDAAIKGKIDPLVGLKENVIIGKLIPAGTGMTRYRNLDIIDNAPQIVEEIE
EEEIVEEVHEEVDLSRLEQLTN
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
ttgctggatgtaaacaattttgactcaatgcggattggactcgcttcccccgacaagatt
cgtgagtggtcgcacggcgaggtaaagaagcccgagaccatcaactaccgtacgctcaag
cccgagcgcgacggtctcttttgcgagcggatcttcggaccgacgcgcgactgggagtgc
cactgcggcaagtacaagcgcatccgctacaagggcgttgtctgcgaccgctgcggcgtc
gaggtgacgcgtgcgaaggtgcgccgtgagcgcatggggcatatcgagcttgccgcgccc
gtctcgcatatctggtatttcaagggcattccgagccgtatgggactcatcctcgatgtg
tctccgcgttcgctcgaaaaagtcctctattttgcctactacattgtcattgatccgggc
gagaccgatctcaagaaaaaggaactgctctccgagcgcgagtatcacgatgcgcttgag
aagtacggcaatacgttccgtgtcggcatgggggcggaggcgatcaaggaactgctcgaa
gaactcgatcttgagcagatgagcgagcagcttcgaaacgacgtgcgtacgacctccgga
cagaagaaggtacgtgcgatccgtcgcctcgaagtggtcgaggcattccgcaagtccggc
aaccgccccgcgtggatgattatggatgtcgttcctgtcatcccgcccgatctgcgcccg
atggtgcagctcgacggcgggcgctttgcgacctccgacctcaacgatctctaccgccgc
gtcattaaccgcaacaaccgcctgcgccgtctgctcgacctcggtgcgcccgacatcatc
gtgcgcaacgagaagcgtatgctgcaggaggcggtcgatgcgctcatcgacaacggccgc
cgcggccgccccgtcacgggacccggcaaccgcgcgctgaaatccctctcggatatgctg
aagggcaagcagggacgattccgtcagaacctgctcggcaagcgtgtcgactattcggga
cgctccgttatcgtcgtcggccctgagctgaagctgcatcagtgcggcttgccgaaggag
atggcgctcgaactcttcaagccgtttgtcatgaaaaaactgcaggcggacggcgcggcg
cacaacatcaagtcggcaaagcgcatggtggagcgtgcgcgtcccgaggtctgggacgtg
cttgaggatgtcattaaggaacatcccgtgctgctcaaccgcgcaccgacgctgcaccgc
ctcggcattcaggcattcgagcctgtgctgaccgagggacgcgcgctgaagctgcatccg
ctcgcatgtacggcgtacaacgcggactttgacggtgaccagatggcgatccatctgccg
ctctctgccgaggcgcagaccgaagcccgtgtgctcatgctcgcggcgaatcacatcctc
gcgccgaaggacggcaagcccatcattgtcccctcgcaggatatggtgctcggttcgtac
tacctcacgaagctcaaacccggtgctgtcggcgagggcaaggtctttacaggcattgcg
gaagcgcttctcgcctatcaggagaaggtactcgatctgcaggcagagatccgcgtgcag
gtcgcgggctacggacttgtccgcagctccctcggccgactgattttcagcgagatcctg
cccgaggagctccgtcattaccgacaggatgcggagacgggcgagtggagcctcggcgtc
ctcatgaacaagaaggagctcggcagactcgtcgcaaactgctacgatcacttcggcgcg
accaagaccgccgaggttatcgacaatgtgaaaaatctcggctaccactacgcctgcatc
gcgggcatgacggtcgctgtctccgatgtcatcgtaccgccaaagaagaaggagatcatc
gcggatacgcaggggcaggtcaacaaggttgagcgccagtttgcccgcggtctgatcacc
gaggacgagcgatataagaaggttgttcagctgtggacgaaggcgacggacgatgtcgcg
gacgcaatgatggacaacatggatccgttcaatccgatctttatgatggcggactccggt
gcgcgcggcaacaagcagcagatgcgccagctcgcgggcatgcgcggacttatggcagac
ccgtccggcaagatcatcgacctgccgattacggcgaacttccgtgagggccttacggtt
tccgattacttcatctcctcccacggtgcgcgcaagggccttgcagatacggcactccgt
acggcagactcgggctacctgacgcgccgtcttgtcgacgtggcacaggatgtcattgtc
cgcgaggaggactgtgatgtctccgcaatcaatctcctgcaggtgcgcgcgcggctcgca
gagtctgcatttgatgcactcgaactccttgtggagagcctgatggggcggctcctcgct
gcggcgatctacgatcccgagacgaaggacgtgctctatccgcaggataccgtcctcgac
gacgaggtgctcgagaccatcggcgagcgcgacatccgagagatcatggtgcgcggctcc
tctgtgagtgtcgagggtgccgtcagcaacgcaatgattacggagagcattacgctcggc
gaaccggatgcgaaaaagcgcaagaaggcacgcacggcgataatccgtgaactcagcggc
aaagaggttgtgcgtgatgccgcccttgacgacggcacgattctcgccgccgaaggagcg
atgctcacggacaagatggtggaagccatcatcgactcggagctgcatgagcttcacatc
cgcaacaacaacgtgcgcggcatcgaggtcgaggcaatcaccgagggtacgggtgtcatt
gagtcgcttgccgaccgcattgtcggacgcgtgctcgccgaggacattgtggacgaggcg
acgggtgagaccatcgcccatatcaatgaccctgtggacgaggctctcgcgaagcggatc
gagggcgtgcgcaagcgcgtttccattcgcagcgtgctgacctgcaagtcgcagttcggt
gtctgcatgaagtgctacgggcgcgaccttgccaaccaggcggaggtcgagatcggcgag
gcagtcggcatcatcgccgcacagtcgatcggcgagccgggcacacagctcacgatgcgt
acgttccactcgggcggtgttgcgggcgatgatatcacgcagggtctgccgcgcgtcgag
gagctcttcgaagcacgcaaacccaagcacaacgcgatcattgcggagaacgagggtgtc
gcccgcatcgacgatacaggcaagggcatgcgcacggtcacgattacgcccgagggcggc
gtgccgcgcgagtattccgtaccgtttggcgcccgcatggcggtgcgtgacgggatggag
ctgaaggtcggtgacaagatcaccgagggctctgtgaacccgcacgacatcctgcgcgtc
tgcggcctgcaggcgactcagcgttatctcgtctacgaggtgcagaaggtctacaagtcg
cagggcgttgaaatcaacgacaaacacatcgaggtcatggtgcggcagatgctgcacaag
gtcaagatcgaagaagccggcacgacggatttcctgccgggtgaatacatcgagatcaac
acgtttgaggcggcgaataccaaggcgatcgaggaggacggcgagcccgcagtggcaaag
cccatcctgctcggcatcacaaaggcatcgctcgcgacggattccttcctctcggcggca
tccttccaggagaccacgcgcgtcctcaccgacgctgcgatcaaggggaagatcgatccg
ctcgtggggctcaaggagaatgtcatcatcggcaagcttatccctgccggaacgggtatg
acccgctaccgcaaccttgacatcatcgacaatgcaccgcagatcgttgaggagatcgag
gaggaagagattgtcgaggaagtgcacgaagaggtcgacctctcgcgcctcgagcagctg
acaaactga
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