Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C00410
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Entry
STMDT12_C00410 CDS
T01742
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sem03000
]
STMDT12_C00410 (nhaR)
Transcription factors [BR:
sem03000
]
Prokaryotic type
Helix-turn-helix
LysR family
STMDT12_C00410 (nhaR)
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BAJ34984
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Position
47424..48317
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AA seq
297 aa
AA seq
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MSHINYNHLYYFWHVYKEGSVVGAAEALFLTPQTITGQIKALEERLQGKLFKRKGRGLEP
SELGELVFRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSSVLDAAVVVDE
PIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVKIGECSVSFWCTNPLPE
KAFPACLEERRLLVPGRRSMLGRKLLNWFNSQGLQVEILGEFDDAALMKAFGATHDAIFV
APSLYSLDFYADESVIEIGRVENVMEEYHAIFAERMIQHPAVQRICNADYSALFKLQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatattaactacaaccatctttattatttctggcatgtctataaagaaggttct
gtcgtgggtgccgcagaggcgctttttctgacgccgcaaaccattactggtcaaattaaa
gccctggaagagcgtttacaggggaagctatttaaacgtaagggacgcggtcttgaaccc
agcgaactgggcgagctggtttttcgctatgcggacaaaatgtttacgctaagccaggag
atgctggatatcgtcaattaccgcaaagaatcaaacctgttgtttgatgtcggcgtcgcc
gatgctttatccaagcgtctggtcagcagcgttctggatgcggcggtggtggtggacgaa
cccatacatctgcgttgcttcgagtccacgcacgaaatgttgctcgaacagctcagccag
cacaagctggatatgattatctccgactgcccgatagattccacgcagcaggaggggcta
ttctcagtcaaaatcggcgaatgcagcgtcagtttctggtgtacgaatccgcttcctgaa
aaagcgttccctgcctgcctggaagagcgacggttgctggtgccgggacggcgctcaatg
ctggggcgtaagttgttgaactggtttaattcacaggggttgcaggttgagatcctcggt
gaatttgatgatgcggccttaatgaaggcgtttggcgcgacgcacgatgcgatttttgtg
gcgccgagcctttattcgctggatttttatgccgatgagtcggtaatagagattgggcgc
gtggagaatgtcatggaagaatatcatgcgatttttgccgagagaatgatccagcatccg
gcggtgcagcgtatttgcaatgcggactactcggcattgtttaaactacagtag
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