Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C00680
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Entry
STMDT12_C00680 CDS
T01742
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Pathway
sem00220
Arginine biosynthesis
sem00240
Pyrimidine metabolism
sem00250
Alanine, aspartate and glutamate metabolism
sem01100
Metabolic pathways
sem01110
Biosynthesis of secondary metabolites
sem01240
Biosynthesis of cofactors
Module
sem_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
STMDT12_C00680 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
STMDT12_C00680 (carB)
00220 Arginine biosynthesis
STMDT12_C00680 (carB)
Enzymes [BR:
sem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
STMDT12_C00680 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
Radical_SAM
BamE
Motif
Other DBs
NCBI-ProteinID:
BAJ35011
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Position
77047..80274
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AA seq
1075 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA
DAIDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVG
ITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDT
AYMYSTYEDECEANPSIDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVP
VIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEIGYPLVVRPSYVL
GGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGEMVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPPYYSVKEVVLPFNKF
PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRALLSVREGDKERVVDL
AAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGR
RAIEDSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVTSVQEMHAQIKKS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaaaagcatcctgattctgggcgcgggcccgattgttatc
ggtcaggcgtgtgagtttgactactccggcgctcaggcgtgtaaagccctgcgcgaagag
ggctatcgcgtcattctggtgaactccaacccggccaccatcatgaccgacccggaaatg
gccgatgccacctacatcgagccgattcactgggaagtggtgcgcaaaatcattgaaaaa
gagcgtccggatgcggtgctgccgaccatgggcggccagaccgcgctgaactgcgcgctg
gagctggagcggcagggcgtgctggaagagttcggcgtcaccatgattggtgcgaccgcc
gacgccattgataaagccgaagaccgtcgtcgcttcgatatcgcgatgaagaaaattggt
ctcgacaccgcgcgttccggtatcgcgcacactatggaagaagcgctggcggttgccgct
gacgtgggcttcccgtgcatcatccggcctagctttaccatgggcggcaccggcggcggt
atcgcttacaaccgtgaagagttcgaagaaatctgcgaacgcggtctggacctctcgcca
accaacgagctgctgattgatgaatcgctgatcggctggaaagagtacgagatggaagtg
gtgcgtgataaaaacgacaactgcatcatcgtctgctctatcgaaaacttcgatgcgatg
ggtatccacaccggtgactccatcaccgtggccccggcacagacgctgaccgacaaagaa
taccaaatcatgcgtaacgcctcgatggcggtactgcgtgaaatcggcgtcgaaaccggc
ggttctaacgtccagttcgcagtgaacccgaaaaacggccgtctgatcgttatcgaaatg
aacccgcgcgtatcccgctcctcggcgctggcgtcgaaagccaccggtttcccgattgcc
aaagtggccgccaaactggcggtaggttacacccttgacgaactgatgaacgacatcacc
ggcgggcgcactccggcctccttcgagccgtccatcgactatgtggttactaaaattccg
cgctttaactttgagaaattcgccggtgccaacgaccgtctgaccacccagatgaaatcg
gtcggagaagtgatggcgattggccgcacgcagcaggaatccctgcaaaaagcgctgcgc
ggcctggaagtcggcgccaccggttttgacccgaaagtgagcctcgacgacccggaagcg
ctgaccaaaatccgccgcgagctgaaagacgcgggcgcagatcgtatctggtacatcgcc
gatgctttccgcgcaggcctctccgtcgatggcgtctttaacctgaccaacatcgaccgc
tggttcctggtgcaaattgaagagctggtgcgtctggaagagaaagtggctgaagtcggg
attactggcctcaacgccgacttcctgcgtcagctcaagcgtaaaggttttgccgatgcg
cgtctggcaaaattggcgggcgtgcgcgaggcggaaatccgcaaactgcgcgaccagtat
gacctgcacccggtctacaagcgtgtggatacctgcgcggcggaattcgccaccgacacc
gcctatatgtactccacttatgaagatgagtgcgaagcgaacccgtccattgaccgcgat
aaaatcatggtcctcggcggcggcccgaaccgtatcggccagggtatcgaatttgactac
tgctgcgtacacgcctcgctggcgctgcgcgaagacggttacgagaccattatggtcaac
tgtaacccggaaaccgtctccaccgactacgacacttccgaccgtctgtacttcgagccg
gtcacgctggaagacgtgctggaaatcgtgcgcatcgagaagccgaaaggcgttatcgtg
cagtacggcggccagacgccgctgaagctggcgcgcgcgctggaagcggcaggtgtgccg
gtaatcggcaccagcccggacgccatcgaccgcgcggaagaccgcgagcgcttccagcac
gcggttgaccgtctgaagctgaagcaaccggccaacgccaccgtcaccgccattgaacag
gctgtcgaaaaagcgaaagagatcggctacccgctggtggtacgtccttcttacgtgctg
ggcggtcgggcgatggaaattgtctatgacgaagccgacctgcgtcgctacttccagacg
gcggtcagcgtctctaacgatgcgccggtgctgctggaccgcttccttgatgacgcggtt
gaagtggacgtggacgctatctgcgacggcgaaatggtgctgattggcggcattatggag
cacattgagcaggcgggcgtacactccggcgactccgcctgttccctgccggcctacacg
ctgagccaggaaattcaggacgtgatgcgccagcaggtgcagaagctggccttcgagttg
caggtgcgcggcctgatgaacgtgcagtttgcggtcaaggacaacgaagtctacctgatt
gaagtcaacccgcgtgcggcgcgtaccgtaccgttcgtctccaaagccaccggcgttccg
ctggcgaaagtggcggcgcgcgtgatggccggcaaatcgctgaccgagcagggcgtgacc
caagaaattatcccgccgtactactcggtgaaagaagtggtgctgccgttcaacaaattc
cccggcgttgacccgctgttagggccagaaatgcgctccaccggggaagtgatgggcgtg
ggccgtaccttcgcggaagcgttcgctaaggcgcagctgggcagtaactccaccatgaag
aaacagggccgtgcgctgctctccgtccgcgaaggcgacaaagagcgcgtggtggatctc
gccgccaagctgctgaaacagggctttgagctggatgccacccacggtacggcgattgtg
ctgggcgaagccggtatcaacccgcgtctggtgaacaaggtgcacgaaggtcgtccgcac
attcaggaccgtatcaagaatggcgaatatacctatattatcaacaccaccgcaggtcgc
cgcgcgattgaagactccagggtgattcgccgcagcgcgctgcagtataaagtgcattat
gacaccacgctgaacggcggttttgccacgacgatggcgctcaatgccgatgccaccgag
aaggtaacctcggtgcaggaaatgcacgcgcagatcaaaaagtcgtaa
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