Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C02350
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Entry
STMDT12_C02350 CDS
T01742
Name
(GenBank) lysine decarboxylase 2
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Pathway
sem00310
Lysine degradation
sem01100
Metabolic pathways
sem01110
Biosynthesis of secondary metabolites
sem01120
Microbial metabolism in diverse environments
Module
sem_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
STMDT12_C02350
Enzymes [BR:
sem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
STMDT12_C02350
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
Motif
Other DBs
NCBI-ProteinID:
BAJ35178
LinkDB
All DBs
Position
276023..278164
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AA seq
713 aa
AA seq
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MNIIAIMGPHGVYYKDEPIKELERALQSLGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSEINQLNEYLPLYAFINTNSTLDVSVHDMRMALWFFEYALGLAEDIATRIHQY
TNEYLDNITPPFTKALFTYAKEGKYTFCTPGHMAGTAYQKSPPGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPRREFTRASIESKIEETPQAQWPVH
AVITNSTYDGLLYNTNWIKQMLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGDRVPGKVIF
ETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASIETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDSWFFDIWQPEEVDEAECWPVTPGETWHGFTDAD
DDHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQH
DLPGLMLRAFEVLPEMIMTPHQAWQRQIKGEVETVALDQLPGRVSANMILPYPPGVPLLM
PGERITQQSRAVLDFLLMLCSIGQHYPGFETDIHGAKRNEDGVYQVRVLKHAC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatcgccattatggggccgcacggggtttattataaagatgaacccatcaag
gagcttgagcgtgcattacaatccctgggatttcaaattatctggccgcaaaatagcgtt
gacttgttgaagtttattgaacataacccgcgcatctgcggcgttatttttgactgggat
gaatacagtctcgacctttgtagcgaaatcaaccagctaaatgaataccttcctctctac
gcctttatcaataccaactccacgctggacgttagcgttcacgatatgcgcatggcgctg
tggttttttgagtatgcattggggctggctgaagatatcgcgacgcgcattcatcaatat
acaaacgaatatctcgataatattacgccgccgtttaccaaagcgctttttacctacgcc
aaagaaggaaaatataccttttgtacgccgggtcatatggcgggaacggcgtatcagaaa
agcccgccaggctgcctgttttatgacttttttggcggcaataccttaaaagctgatgtg
tcgatttcggtgactgaactgggatcgctgctggatcacaccgggccgcatctggaagcg
gaagagtatatcgcccgtacttttggcgccgagcagagctatatggtgacgaacggtacg
tcgacctcgaataaaattgtcggtatgtatgccgcgcctgcgggaagtacgctacttatt
gatcgtaattgtcataaatcgctggcgcatttgctgatgatgagcgatgtggtgcctctc
tggttgaagccgacgcgcaatgcgctcggcattctcggcggtattccccgaagggaattt
acccgtgcaagcatcgaaagcaagatagaggagacccctcaggcgcaatggccggtgcat
gcggttatcaccaattcgacttacgatggtctgctgtataacactaactggatcaagcaa
atgctggacgttccctcgatccattttgattccgcctgggtaccctatacccatttccat
ccgatctaccaggggaaaagcgggatgagcggcgatcgggtgcccggaaaagtgattttc
gaaacgcaatccacccataaaatgctggcggctttttcgcaggcgtcgcttattcatatc
aaaggggaatatgacgaagagacgtttaacgaagcgtttatgatgcacacttccacatcg
ccgagctatcccattgtcgcctctatcgagaccgcagcggcgatgctgcgcggcaatcca
gggaaaagattgattaatcgttcggtggaacgggcgctccattttcgtaaagaggtacag
cggctacgtgaagagtccgatagctggttctttgatatctggcagccggaagaggttgat
gaggccgaatgctggccggtcacgccgggagaaacctggcatggcttcaccgatgccgat
gacgatcatatgttcctcgatccggttaaggtgacaatcctgacgccggggatggatgaa
cagggcaacatgagcgaagaggggatacccgccgcgctggtggcgaagttccttgatgag
cgaggcgtggtggtggaaaaaaccgggccgtataatctgctgtttttgttcagcataggg
attgataagacccgtgcgatggggctgctgcgcggactgacggaatttaaacgcgcctac
gatcttaacctgcgcgtcaaaaatatgttgccggatctgtatgcggaagatccggatttt
tatcgcaatatgcgcattcaggatctggcgcaggggatccataaactgatccgccagcac
gatcttccggggctgatgctgcgggcgttcgaggttttaccggagatgatcatgaccccg
caccaggcctggcagcgtcagatcaaaggtgaggtggaaaccgtggcgctcgatcaactg
ccagggcgcgtttccgcgaatatgatcctgccttatccgccaggcgttccgctgttgatg
cccggcgagaggatcacgcaacagagtcgggccgtgctcgattttctgctgatgctctgc
tcgattggccagcattatcccggttttgaaacggatattcacggcgcgaaacggaatgaa
gacggggtgtaccaggtacgagtcttaaaacacgcctgctag
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