Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C05810
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Entry
STMDT12_C05810 CDS
T01742
Name
(GenBank) DNA-binding transcriptional repressor AllR
KO
K10973
IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sem03000
]
STMDT12_C05810
Transcription factors [BR:
sem03000
]
Prokaryotic type
Helix-turn-helix
IclR family
STMDT12_C05810
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GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
HTH_5
HTH_20
DUF742
Motif
Other DBs
NCBI-ProteinID:
BAJ35524
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Position
614611..615429
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AA seq
272 aa
AA seq
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MTEVRRRGRPGQAEPTAQKGAQALERGIAILQYLERSGGSSSVSDISGSLDLPLSTTFRL
LKVLQAADFVYQDSQLGWWHIGLGVFNVGSAYIHNRDVLSVAGPFMHRLMLLSGETVNVA
IRNGNEAVLIGQKECKSMVRMCAPLGSRLPLHASGAGKALLYPLTEEELVGIVVNTGLRR
FTPTTLVDLPILLKNLEQAREQGYTVDQEEHVVGLNCIASAIYDDAGSVVAAISISGPAS
RLTEDRFISQGELVRDTAKDISTALGLKPPVA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagtaagacgacgcggcaggccaggacaggcagagccgactgcgcagaaaggc
gctcaggcgctggagaggggcatagcgatattgcaatatctcgaaagaagcggcggcagt
tcatcagttagcgatatttccggcagcctggatttaccgctttctacgacgtttcgcctg
ttaaaggtactgcaagcggctgattttgtgtaccaggatagccagcttggctggtggcat
attggtttaggcgtatttaatgtgggctctgcgtatattcataatcgcgatgtcctctcg
gtagccgggccctttatgcaccgacttatgctgctttctggcgagacggtcaacgtagcg
attcgcaacggtaatgaagcggtgttaatcggtcaaaaggagtgcaaatcgatggtcaga
atgtgcgcgcccttagggagtcgtctgccgttacatgcttccggcgccggaaaagcgctg
ctttacccgctcaccgaagaagagctggtggggatcgtcgtcaataccggtttgcggcgg
tttacgccgaccactctggtggatttacctatcctgcttaaaaatctggagcaggcgcgt
gaacagggctacaccgtcgaccaggaagaacatgttgtcgggctgaattgtatcgcctcc
gctatctatgacgatgcgggcagcgtggtcgccgctatctcgatatcgggaccggcttcc
cggctgacggaagatcgctttatcagccagggtgaactggtacgggataccgcgaaagac
atcagtacggcgcttgggctaaaaccccctgtagcctga
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