Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C07650
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Entry
STMDT12_C07650 CDS
T01742
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sem03400
]
STMDT12_C07650
Enzymes [BR:
sem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
STMDT12_C07650
DNA repair and recombination proteins [BR:
sem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
STMDT12_C07650
Prokaryotic type
STMDT12_C07650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAJ35708
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Position
812831..814252
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AA seq
473 aa
AA seq
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MPTHLVWFRRDLRLQDNLALAAACRDASARVLALYISTPAQWQAHDMAPRQAAFISAQLN
ALQTALAEKGIPLLFHEVADFNASIETVKNVCRQHDVSHLFYNYQYEFNERQRDAAVEKT
LPSVICEGFDDSVILAPGAVMTGNHEMYKVFTPFKNAWLKRLKEDIPPCVPAPKIRVSGA
LSTPLTPVSLNYPQQAFDAALFPVEENAVIAQLRQFCAQGADEYALRRDFPAVDGTSRLS
ASLATGGLSPRQCLHRLLAEQPQALDGGPGSVWLNELIWREFYRHLMTWYPALCKHQPFI
RWTKRVAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDRDGEFIRQW
LPALRDIPGKAIHEPWRWAEKAGVVLDYPRPIVEHKQARIATLSAYEAARKGA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccatttagtctggttcaggcgcgatctgcgtttacaggataaccttgcgctg
gccgccgcctgccgcgatgcatccgcgcgggtgctggcgctttatatttccacccccgcg
cagtggcaggcccatgatatggcgccgcggcaggcggcattcatcagcgcgcagctcaat
gcgctacagacggcccttgcagagaaaggcattccgttgctgtttcatgaagtggcggat
tttaacgccagtattgaaacggtcaaaaacgtttgccgacagcatgacgtcagccatctg
ttttataactatcagtatgagtttaacgagcgtcagcgtgatgcggcggtggaaaaaacg
ctgccctctgtcatctgcgaaggctttgacgatagcgtgattctggcgcccggcgcggtg
atgaccggcaatcatgaaatgtataaagtttttacgccgtttaaaaatgcctggttgaaa
cggctaaaagaagatatcccgccgtgcgttccggccccgaagatccgggtgagcggcgcg
ctttctacacccttaacgccagtctcgcttaactacccgcaacaggcgtttgacgccgcg
cttttcccggtggaagaaaacgcggtcatcgcgcagctacgtcagttttgcgcgcagggc
gcagacgagtatgcgttacggcgcgatttccctgcggttgacggcaccagtcggctttcc
gccagcctggcgacgggcggcctgtcgccgcgacagtgcctgcaccgattactggcggag
cagccgcaggcgctggacggcgggccgggaagcgtctggttgaatgagctcatctggcgg
gaattttaccgtcatttaatgacctggtatccggcattatgcaaacaccagccgtttatc
cgctggacaaaacgcgtcgcgtggcaggaaaacccgcactattttcaggcatggcagaaa
ggcgaaaccggttatcccattgtcgatgcggcgatgcgccagcttaacgcgacgggctgg
atgcataaccgtttacgcatgattaccgccagctttctggtaaaagatctgttgattgac
tggcggttgggggagcgctatttcatgtcgcagcttattgacggcgatcttgccgccaat
aatggcggctggcagtgggccgcctcaaccggtactgacgccgcgccttattttcgtatt
tttaatcccacgactcagggagagaggttcgatcgcgacggcgaatttatccgccagtgg
ctaccggcattacgcgatatccctggaaaagcgattcacgagccgtggcggtgggcggaa
aaagcgggagtcgtgcttgattatcctcggcctattgtggagcacaaacaggcgagaatc
gcaacgctttccgcctatgaggcggcgagaaaaggggcgtga
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