Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C08530
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Entry
STMDT12_C08530 CDS
T01742
Name
(GenBank) leucine-rich repeat-containing protein
KO
K23946
E3 ubiquitin-protein ligase SlrP [EC:
2.3.2.27
]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Pathway
sem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
STMDT12_C08530
Enzymes [BR:
sem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
STMDT12_C08530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
LRR_TTSS
LRR_4
LRR_8
Sif
Yopt
SYCE1
Motif
Other DBs
NCBI-ProteinID:
BAJ35796
LinkDB
All DBs
Position
905772..908069
Genome browser
AA seq
765 aa
AA seq
DB search
MFNITNIQSTARHQSISNEASTEVPLKEEIWNKISAFFSSEHQVEAQNCIAYLCHPPETA
SPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGG
KSVTYTRVTESEQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNK
TELRLKILGLTTIPAYIPEQITTLILDNNELKSLPENLQGNIKTLYANSNQLTSIPATLP
DTIQEMELSINRITELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPA
HLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALTSLPASLPPELQVLDVSKNQITV
LPETLPPTITTLDVSRNALTNLPENLPAALQIMQASRNNLVRLPESLPHFRGEGPQPTRI
IVEYNPFSERTIQNMQRLMSSVDYQGPRVLFAMGDFSIVRVTRPLHQAVQGWLTSLEEED
VNQWRAFEAEANAAAFSGFLDYLGDTQNTRHPDFKEQVSAWLMRLAEDSALRETVFIIAM
NATISCEDRVTLAYHQMQEATLVHDAERGAFDSHLAELIMAGREIFRLEQIESLAREKVK
RLFFIDEVEVFLGFQNQLRESLSLTTMTRDMRFYNVSGITESDLDEAEIRIKMAENRDFH
KWFALWGPWHKVLERIAPEEWREMMAKRDECIETDEYQSRVNAELEDLRIADDSDAERTT
EVQMDAERAIGIKIMEEINQTLFTEIMENILLKKEVSSLMSAYWR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatattactaatatacaatctacggcaaggcatcaaagtattagcaatgaggcc
tcaacagaggtgcctttaaaagaagagatatggaataaaataagtgcctttttctcttca
gaacatcaggttgaagcacaaaactgcatcgcttatctttgtcatccacctgaaaccgcc
tcgccagaagagatcaaaagcaagtttgaatgtttaaggatgttagctttcccggcgtat
gcggataatattcagtatagtagaggaggggcagaccaatactgtattttgagtgaaaat
agtcaggaaattctgtctatagtttttaatacagagggctataccgttgagggaggggga
aagtcagtcacctatacccgtgtgacagaaagcgagcaggcgagtagcgcttccggctcc
aaagatgctgtgaattatgagttaatctggtctgagtgggtaaaagaggcgccagcgaaa
gaggcagcaaatcgtgaagaagccgtacaacggatgcgtgactgcctgaaaaataataag
acggaacttcgtctgaaaatattaggacttaccactatacctgcctatattcctgagcag
ataactactctgatactcgataacaatgaactgaaaagtttgccggaaaatttacaggga
aatataaagaccctgtatgccaacagtaatcagctaaccagtatccctgccacgttaccg
gataccatacaggaaatggagctgagcattaaccgtattactgaattgccggaacgtttg
ccttcagcgcttcaatcgctggatcttttccataataaaattagttgcttacctgaaaat
ctacctgaggaacttcggtacctgagcgtttatgataacagcataaggacactgccagca
catcttccgtcagggattacccatttgaatgtgcagagtaattcgttaaccgctttgcct
gaaacattgccgccgggcctgaagactctggaggccggcgaaaatgccttaaccagtctg
cccgcatcgttaccaccagaattacaggtcctggatgtaagtaaaaatcagattacggtt
ctgcctgaaacacttcctcccacgataacaacgctggatgtttcccgtaacgcattgact
aatctaccggaaaacctcccggcggcattacaaataatgcaggcctctcgcaataacctg
gtccgtctcccggagtcgttaccccattttcgtggtgaaggacctcaacctacaagaata
atcgtagaatataatcctttttcagaacgaacaatacagaatatgcagcggctaatgtcc
tctgtagattatcagggaccccgggtattgtttgccatgggcgacttttcaattgttcgg
gtaactcgaccactgcatcaagctgtccaggggtggctaaccagtctcgaggaggaagac
gtcaaccaatggcgggcgtttgaggcagaggcaaacgcggcggctttcagcggattcctg
gactatcttggtgatacgcagaatacccgacacccggattttaaggaacaagtctccgcc
tggctaatgcgcctggctgaagatagcgcactaagagaaaccgtatttattatagcgatg
aatgcaacgataagctgtgaagatcgggtcacactggcataccaccaaatgcaggaagcg
acgttggttcatgatgctgaaagaggcgcctttgatagccacttagcggaactgattatg
gcggggcgtgaaatctttcggctggagcaaatagaatcgctcgccagagaaaaggtaaaa
cggctgttttttattgacgaagtcgaagtatttctggggtttcagaatcagttacgagag
tcgctgtcgctgacaacaatgacccgggatatgcgattttataacgtttcgggtatcact
gagtctgacctggacgaggcggaaataaggataaaaatggctgaaaatagggattttcac
aaatggtttgcgctgtgggggccgtggcataaagtgctggagcgcatagcgccagaagag
tggcgtgaaatgatggctaaaagggatgagtgtattgaaacggatgagtatcagagccgg
gtcaatgctgaactggaagatttaagaatagcagacgactctgacgcagagcgtactact
gaggtacagatggatgcagagcgtgctattgggataaaaataatggaagagatcaatcag
accctctttactgagatcatggagaatatattgctgaaaaaagaggtgagctcgctcatg
agcgcctactggcgatag
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