Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C10120
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Entry
STMDT12_C10120 CDS
T01742
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sem01002
]
STMDT12_C10120
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sem01011
]
STMDT12_C10120
Peptidases and inhibitors [BR:
sem01002
]
Cysteine peptidases
Family C82
STMDT12_C10120
Peptidoglycan biosynthesis and degradation proteins [BR:
sem01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
STMDT12_C10120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
BAJ35955
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All DBs
Position
1082678..1084519
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AA seq
613 aa
AA seq
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MLLNKMCGRCLSAISLCLAVTFAPLFNAQADEPEMIPGDSAVAATDLAGPQKQSAATAIM
AGIQPLPEGVSAEKVRADLQSQLPSGYTPVYMSQLTLLYAARDMKPMWDNRDAVKAFQQQ
LAEVAIAGFQPQFTAWVALLTDPAVNGMARDVVLSDAMMGYLHFIANIPVKGQRWLYSNK
PYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQYAPMHDALLKLVADSRPWPQLTN
TATLRPGQWSNDVPALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDETSVAHDE
PTARRSKPAPAARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALN
IQRLRLLPAELSTGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVN
PPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFR
FQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLL
QDAGWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYDLTARS
SAQIVPKVEQLIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaataagatgtgtggtcgttgtctgtcggcaatcagtttatgcctggccgta
acattcgctccactgttcaatgcgcaggccgatgagcctgaaatgatacctggcgatagc
gccgttgccgcgacggatctggctgggccgcagaagcaatcagccgcgacggcgattatg
gccgggattcagccgctgccggagggcgtttcagccgagaaagtccgggctgatttacag
tcgcagcttccttccggctatacgccggtctatatgagccagctgacattgctgtatgcc
gcgcgcgacatgaagcccatgtgggataatcgcgatgcggtgaaagccttccagcaacag
ttggcggaggtggcgattgccggattccagccgcagtttaccgcctgggtggcattgttg
accgatcccgccgtaaacggtatggcgcgcgatgttgtgttgtcagacgccatgatgggc
tatctccatttcattgcgaatatccccgtcaaaggccagcgctggttatatagcaacaaa
ccttacgcattggcgacgccgccagtctcggtgattaaccagtggcaaatcgcgctggaa
gagggccagttgccgatgtttgtcgccagcctggcgccgcagcacccacagtatgcgccc
atgcatgatgcgctgctgaagctggtggcggactctcgcccgtggccgcagttgaccaat
accgcgacgctgcgcccggggcaatggagtaacgatgtgcctgcgctgcgcgaaatatta
cagcgtacggggatgctggatggcggtccaaagatagccttacccggcgataacactgct
gatagcgccgtcgtcagcccctccgccgtggtcgacgaaacatcggtggcgcacgacgaa
ccaacggcccgccgtagtaagccggctccggcggcacgcgcctacgatcgtgaactggtc
gaggcggtaaagcgttttcaggcatggcaagggctgggggcggatggcgttattggcccg
gcgacgcgtaactggcttaatatgacccccgcgcaacgcgcaggcgtactggcactgaat
atccaacgtttacgcctgctgccagcggaactctctaccggtattatggtaaacattccc
gcttattcgctggtctactatcagaatggcaaccaggtgctggcttcaagggtgatcgtc
gggcgtcccgatcgtaaaacgccgatgatgagcagcgcgctgaataatgtggtggtgaac
ccgccgtggaacgttccgcccacgcttgcgcgtaaagacattttaccgaaggtgtggaat
gacccaggctatctggagcgccatggctacaccgtgatgcgcggctggaacagcaaagaa
gcgatcgatccgtggcaggttgactgggccaccattacgccatcgaatcttccgttccgt
ttccagcaggcgccaggcgcgcacaattcgctggggcgttataaatttaatatgccgagt
tcagatgcgatctatctgcacgatacgcctaaccatactctctttcagcgtgacgccagg
gcgttaagttccggctgcgtgcgggtcaataaggcctctgagctggcgaatatgctcttg
caggatgctggctggaacgatgcgcggatctcaggcgccctgaagcaaggcgacacgcgg
tatgtcaatatccggcagaacattccagtaaatctttactatctgaccgcatttgtcggc
gcagatggacgtatgcaatatcgtacagatatttacaattacgatctcacagcgcgatcc
agcgcacaaattgtgccaaaggttgaacaattaatcaggtaa
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