Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C20110
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Entry
STMDT12_C20110 CDS
T01742
Name
(GenBank) very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sem03400
]
STMDT12_C20110
DNA repair and recombination proteins [BR:
sem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
STMDT12_C20110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
BAJ36954
LinkDB
All DBs
Position
complement(2069419..2069889)
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AA seq
156 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLAGLLSAQGITFHTQDATLPGKPDFVVNDYDCV
IFTHGCFWHHHHCYLFKVPATRTAFWLEKIGKNVERDERDIQRLQALGWRVLIVWECALR
GRAKLSDAALAERLEEWICGGGASAQIDTQGIHLLA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttcacgataaagccacgcgcagtaaaaatatgcgcgcgatagcgacccgc
gatacggctattgaaaaacgtcttgctggcctgttaagcgcacaggggattacgtttcat
actcaggacgcgacattaccgggcaagccggactttgtggtgaatgattatgattgtgtg
atttttactcacggctgcttttggcatcatcaccactgttatctgttcaaagtgccggcc
acgcgaacggctttctggctggaaaaaatcggtaagaacgttgagcgcgatgagcgcgat
attcagcgtttacaggcgcttggctggcgggtactgatcgtctgggagtgcgccttgcgc
gggcgagcgaaattgagcgacgcggcgttggcggagcgcctggaagagtggatctgcggc
ggcggcgccagcgcgcagatcgacacccaggggattcatctactggcgtga
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