Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C21950
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Entry
STMDT12_C21950 CDS
T01742
Name
(GenBank) tRNA-dihydrouridine synthase C
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sem03016
]
STMDT12_C21950
Transfer RNA biogenesis [BR:
sem03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
STMDT12_C21950
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
NMO
Oxidored_FMN
Motif
Other DBs
NCBI-ProteinID:
BAJ37138
NITE:
STMDT12_C21950
LinkDB
All DBs
Position
complement(2266266..2267204)
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AA seq
312 aa
AA seq
DB search
MRVLLAPMEGVLDALVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELHHASRTP
SGTPVRIQLLGQHPQWLAENAARATALGSYGVDLNCGCPSKVVNGSGGGATLLKDPELIY
QGAKAMRAAVPSHLPVTVKVRLGWDSGDRKFEIADAVQQAGASELVVHGRTKAQGYRAEH
IDWQAIGEIRQRLTIPVIANGEILDWQSAQACMATSGCDAVMIGRGALNIPNLSRVVKYN
EPRMPWPEVVTLLQKYTRLEKQGDTGLYHVARIKQWLGYLRKEYIEATELFQSIRALNRS
SEIARAIQAIKI
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttttactggcgccgatggaaggcgtgctcgacgcgttagtgcgcgagctgctg
accgaagtgaatgattacgatctctgcatcaccgaatttgtgcgcgtggtggatcagctg
ctgccggtaaaagtgtttcatcgcatctgcccggagttgcatcacgccagccgcacgccg
tccggcacgccggtgcgtattcagcttctgggccagcatccgcagtggctggcggaaaac
gccgcgcgggcgacggcgttgggatcgtatggcgtggacctgaactgcggctgtccgtca
aaagtggtgaacggcagcggcggcggcgcgacattgctcaaagatcccgaactcatctat
cagggcgcgaaagcgatgcgggccgcggtaccgtcgcatcttccggtgacggtaaaagtg
cgtctcggctgggatagcggcgatagaaaatttgaaatcgccgatgcggtgcagcaggct
ggcgccagtgaactggtggtgcatggtcgtaccaaagcgcagggctaccgcgccgagcat
atcgactggcaggcgatcggcgaaatacgccagcgtctgactattccggttatcgcgaat
ggcgaaatcttggactggcagagcgcgcaggcatgtatggcgaccagcggctgcgatgcg
gtgatgattggccgtggggcgttaaatattcctaacctgagccgggtggtgaagtataac
gagccgcgtatgccgtggccggaagtggtgacgttattacaaaaatatacccgactggaa
aagcagggcgataccggtttatatcatgtcgcgcgtattaaacagtggctgggatattta
cgtaaggaatatattgaggcgacggaactctttcagtcgattcgggcgttaaaccgttcg
tccgagattgcgcgggcgattcaggctattaaaatctaa
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