KEGG   Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C22860
Entry
STMDT12_C22860    CDS       T01742                                 
Symbol
alkB
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
sem  Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:sem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sem03400]
    STMDT12_C22860 (alkB)
Enzymes [BR:sem01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     STMDT12_C22860 (alkB)
DNA repair and recombination proteins [BR:sem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    STMDT12_C22860 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 2OG-FeII_Oxy CLIP_SPH_Scar
Other DBs
NCBI-ProteinID: BAJ37229
LinkDB
Position
complement(2358024..2358674)
AA seq 216 aa
MLDLFADEAPWQEPLAPGAVVLRRFAFRAAQSLLDDIGFVASQSPFRQMVTPGGYTMSVA
MTNCGALGWTTDRHGYCYAVRDPLTDKPWPALPLSFASVCRQAAIAAGYASFQPDACLIN
RYAPGAKLSLHQDKDEPDLRAPIVSVSLGVPAVFQFGGLRRSDPIQRILLEHGDIVVWGG
ESRLFYHGIQPLKAGFHPMTGEFRYNLTFRQAAEKE
NT seq 651 nt   +upstreamnt  +downstreamnt
atgctggatctatttgctgatgaagcgccctggcaagagcccctggcgcctggcgcggtg
gtgttgcgccgctttgcgtttcgcgcggcgcagtcgctattagacgatatcgggtttgtc
gccagtcagtctccgtttcgtcagatggtgacgccgggcggctacaccatgtcggtggcg
atgaccaactgcggcgcgttagggtggactaccgatcgtcacggttattgttatgccgtg
cgcgatccgttgactgataaaccctggcctgcgctgccgttatcgtttgccagcgtatgt
cgtcaggcggcaatcgcggcagggtatgcgagcttccaaccggacgcctgcctgatcaat
cgctacgcgcccggcgcaaaactgtcgctgcatcaggataaagacgagccggatctgcgc
gcgcctattgtctcagtttcgttgggggtgccggcggtttttcagtttggcggcctgcgt
cgcagcgacccgatccagcggatcttactggagcatggcgatatcgtggtctggggcggc
gagtcccggctgttttatcatggtatccagccgcttaaagcgggctttcatcccatgacc
ggtgaatttcgttacaatctcaccttccgtcaggcagctgaaaaagaataa

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