Entry |
|
Symbol |
gabD
|
Name |
(GenBank) succinate-semialdehyde dehydrogenase I
|
KO |
|
Organism |
sem Salmonella enterica subsp. enterica serovar Typhimurium T000240
|
Pathway |
sem00250 | Alanine, aspartate and glutamate metabolism |
sem00760 | Nicotinate and nicotinamide metabolism |
sem01120 | Microbial metabolism in diverse environments |
|
Module |
sem_M00956 | Lysine degradation, bacteria, L-lysine => succinate |
|
Brite |
KEGG Orthology (KO) [BR:sem00001]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
STMDT12_C28440 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
STMDT12_C28440 (gabD)
00310 Lysine degradation
STMDT12_C28440 (gabD)
00350 Tyrosine metabolism
STMDT12_C28440 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
STMDT12_C28440 (gabD)
Enzymes [BR:sem01000]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
STMDT12_C28440 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
STMDT12_C28440 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
STMDT12_C28440 (gabD)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
2963700..2965148
|
AA seq |
482 aa
MQLNDSTLFRQQAFIDGDWRDARGGDVIPVSNPANGKPLGNVPKMGAEETRDAINAANRA
LPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLLVIKQPIGVTAAITPWNFPSAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAQRAGIPAGVFNVVTGSAGDIGGELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLNQAVNKLAVGDGLQADVAIGPLIDEKAVAKVQEHIADALEKGARVITGGEA
HKLGGNFFQPTILADVPDNAKVAKEETFGPLAPLFRFSDEADVIRQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL |
NT seq |
1449 nt +upstreamnt +downstreamnt
atgcaacttaacgactctaccctgttccgccagcaggcctttatcgatggcgactggcgc
gacgcgcgcggcggcgatgtcatccccgtgagcaaccccgccaacgggaaaccgcttggc
aatgtgcccaaaatgggggcggaagagacgcgcgacgccatcaacgccgccaatcgcgcc
ctgcccgcctggcgcgcgctcaccgccaaagagcgagccaatatcctgcgtcgctggttc
aatctgatgatggaacatcaggacgatttggcgcgtctgatgacgctggaacagggtaaa
ccgctggcggaagcgaaaggcgaaattagctacgccgcctcgtttattgaatggttcgcc
gaagaggggaagcgtatctatggcgacacgattccaggccatcaggccgataaacggctg
ctggtgattaaacagcccatcggcgtcaccgccgcgattaccccgtggaactttccctcg
gcaatgatcacccgtaaagccggccccgcgctggccgcaggctgcacaatggtactcaaa
cccgccagccagacgccgttttccgcgctggcgctggcggaactggcccagcgcgccgga
attcccgcaggcgtatttaacgtcgttaccggttcggcaggcgatatcggcggcgagctg
accagcaacccgctggtacgcaaactgtcgtttaccggctcgacggagattggccgccag
ctaatggaacaatgcgccaaagacattaaaaaagtgtcactggaattgggcggcaatgcg
ccgtttatcgtctttgacgatgccgatctggataaagccgtcgaaggcgcgctggcttcg
aagtttcgcaacgccgggcagacctgtgtctgcgccaatagattgtatgttcaggacggc
gtttacgatcgttttgcggaaaaactcaaccaggcggtaaataagctcgcggtcggtgac
ggcctgcaagccgacgtcgctatcgggccgctgattgatgaaaaagccgtggcgaaagtc
caggaacatatcgccgatgcgctggaaaaaggcgcccgcgtcattacgggcggtgaagcg
cacaaattgggcggcaacttctttcaaccgaccattctggcggatgttcctgataacgcg
aaagtcgccaaagaagagacattcgggccgctcgcgcctctgttccgcttcagcgacgag
gcggacgtcatcaggcaggctaacgataccgagttcggcctggcagcctatttttatgca
cgcgatttaagccgcgttttccgcgtcggcgaagcgctggaatacggcatcgtcggtatt
aataccggcattatctccaacgaagtcgcgcctttcggcggcattaaggcctccggatta
ggccgagaaggttccaaatacggcatcgaagattatttagaaatcaaatatatgtgcatc
ggcctttaa |