Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C28860
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Entry
STMDT12_C28860 CDS
T01742
Symbol
srlR
Name
(GenBank) DNA-binding transcriptional repressor SrlR
KO
K02468
DeoR family transcriptional regulator, glucitol operon repressor
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sem03000
]
STMDT12_C28860 (srlR)
Transcription factors [BR:
sem03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
STMDT12_C28860 (srlR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
HTH_5
Put_DNA-bind_N
MarR_2
HTH_20
GntR
HTH_AsnC-type
HTH_Mga
FeoC
Rrf2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BAJ37829
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All DBs
Position
3005064..3005837
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AA seq
257 aa
AA seq
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MKPRQRQAAILEHLQKQGKCSVEELAQYFDTTGTTIRKDLVILENAGTVIRTYGGVVLNK
EESDPPIDHKTLINTHKKALIAAAAVKYIHDGDSIILDAGSTVLQMVPLLSRFSNITVMT
NSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDLNV
GVTTFNEVYTVSNAMCNAAREVILMADSSKFGRKSPNVVCSLETVDKLITDAGIDPAFRQ
ALEAKGIEVIITGESNE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcgtcagcgtcaggccgcgattctggagcacctgcaaaaacagggaaaatgc
tcggttgaagaactggcccagtactttgacacgacaggcaccactatccgtaaagatctg
gtcattctggaaaatgccggaaccgtcatccgcacctatggcggcgtggtgttgaataaa
gaagagtccgatccgcctattgatcacaaaacgcttatcaacacccacaaaaaagcgctg
atagccgcagccgctgtgaaatatatccatgatggcgattccattattctggacgccgga
agtaccgtgttacagatggtgccgttgctttcgcgttttagcaacatcacggtgatgacc
aacagcctccatattgttaacgcgctatcggaactggacaacgaacaaactatcctgatg
cccggcggcaccttccgtaaaaaatcggcgtcgtttcacggtcaactggcggaaaacgcc
tttgagcaattcagctttgataaacttttcatgggaactgacggtattgacctgaatgtc
ggtgtgaccacgttcaatgaggtttacaccgtcagtaacgcaatgtgcaatgcagcacgc
gaggtgattctgatggcggactcctcaaaatttggtcgtaaaagccccaatgtggtgtgc
agtctggaaaccgtcgacaaactgatcacggacgcggggatcgatccggcatttcgtcag
gcgctggaagcaaaagggattgaagtaatcataaccggagaaagcaatgagtga
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