Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C33560
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Entry
STMDT12_C33560 CDS
T01742
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Pathway
sem00550
Peptidoglycan biosynthesis
sem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
STMDT12_C33560
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sem01002
]
STMDT12_C33560
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sem01011
]
STMDT12_C33560
Enzymes [BR:
sem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
STMDT12_C33560
Peptidases and inhibitors [BR:
sem01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
STMDT12_C33560
Peptidoglycan biosynthesis and degradation proteins [BR:
sem01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
STMDT12_C33560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
BAJ38299
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All DBs
Position
3491918..3493351
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AA seq
477 aa
AA seq
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MRFSRFIIGLTTSIAFSVQAANIDEYIKQLPAGANLALMVQKIGAPAPAIDYHSQQMALP
ASTQKVITALAALIQLGPDFRFTTTLETKGNVDNGILKGDVIARFGGDPTLKRQDIRNMV
ATLKKSGVTQIDGNVLIDTSIFASHDKAPGWPWNDLTQCFSAPPAAAIVDRNCFSVSLYS
AQKPNDLAFIRVASYYPVTMFSQVRTLPRGSADAQYCELDVVPGDLNRYTLTGCLPQRAD
PLPLAFAIQDGASYAGAILKQELKEAGITYRGTLLRQTQVNEPGTIVASKQSAPLHDLLK
IMLKKSDNMIADTVFRMIGHVRFNVPGTWRAGSDAVRQILRQQAGIDIGNTIIADGSGLS
RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS
LQGVYNLAGFITTASGQRMAFVQYLSGYAVPPADQRNRRIPLVRFESRLYKDIYQNN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgattttccagatttatcatcggattgaccaccagtatagcgttcagcgttcaggcc
gcgaatattgacgaatacatcaaacagcttccggccggcgccaacctcgcgctgatggtg
caaaagattggcgcgcccgcgccggctattgattatcatagtcagcagatggcgcttccc
gccagtacccaaaaggtgattaccgcgctggcggcgctgattcaactcggcccggatttc
cgttttacgaccacgctggagactaaaggcaacgtcgataacggcatcctgaaaggtgac
gtaattgcgcgcttcggtggcgatccaacgctaaaacgtcaggatattcgcaatatggtc
gcgacgctgaaaaagtccggcgtcacgcaaatcgacggcaatgtgcttatcgacacgtcg
attttcgccagccacgataaagcgccaggctggccgtggaacgacctgacgcagtgtttc
agcgcgcctcccgccgccgccattgttgaccgcaactgtttttctgtgtcgctttatagc
gcgcaaaaaccaaacgatttagcctttattcgcgtggcctcttattatccggtaacgatg
ttcagccaggtacggactctaccgcgcggttcggcagacgcgcagtattgcgagctggat
gttgtgcctggcgatttgaaccgttatacgcttaccggctgtttaccacagcgcgccgac
ccgctgccgctggcctttgctattcaggacggcgccagctacgcgggcgcgatcctcaag
caggaactgaaagaggccgggataacttaccgcggcacgctgctgcgccagacgcaggtt
aacgagcccggaacgatcgtcgccagtaaacagtcggcgccactgcacgatctgcttaag
attatgctgaaaaagtcagacaacatgatcgccgatactgtttttcggatgattggtcat
gtcaggtttaacgtgcctggcacctggcgggcgggatcggatgccgttcgccagatcctg
cgccaacaggcgggaattgatatcggcaataccattattgccgacggttccggtctttct
cgccataatctgatcgctcccgccacgatgatgcaggtgctgcaatatatcgcccaacac
gataacgagctgaactttatctctatgctgccgctggcgggctatgatggttcattacaa
taccgcgccgggctgcatcaggcgggcgtagacggtaaggtttcagcgaaaaccggatca
ctgcagggcgtgtataatctggcgggctttattaccaccgcaagcgggcaacggatggca
tttgtacaatatttgtccggctacgcggttccacctgccgatcagcgtaatcgccgaatc
ccgctggtacgcttcgagagtcggttgtataaggatatttatcagaataactga
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