Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C36950
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Entry
STMDT12_C36950 CDS
T01742
Name
(GenBank) outer membrane usher protein FimD
KO
K07347
outer membrane usher protein
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Pathway
sem02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
STMDT12_C36950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sem02000
]
STMDT12_C36950
02044 Secretion system [BR:
sem02044
]
STMDT12_C36950
02035 Bacterial motility proteins [BR:
sem02035
]
STMDT12_C36950
Transporters [BR:
sem02000
]
Other transporters
Pores ion channels [TC:
1
]
STMDT12_C36950
Secretion system [BR:
sem02044
]
Chaperone-usher system
Type 1 pilus assembly protein
STMDT12_C36950
Bacterial motility proteins [BR:
sem02035
]
Pilus system
Fimbrial proteins
STMDT12_C36950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Big_6
Motif
Other DBs
NCBI-ProteinID:
BAJ38638
LinkDB
All DBs
Position
complement(3847011..3849539)
Genome browser
AA seq
842 aa
AA seq
DB search
MTWTHLPLGNKTSRFTQSALALMIAGTLPAYAGTFNPRFLEDVPGIDQHVDLSMYESNKA
EHLPGKYRVSVVVNEKKMESRTLEFKAATEAQRAKMGESLVPCLSRVQLEDMGVRIDSFP
ALKMAPPEACVAFDDIIPQAASHFDFADQTLIMSFPQAAMKQTARGTVPESQWDEGVNAL
LVDYNFSGSNASYDAHDSETSYNSDSYYLNLRSGMNLGAWRLRNYSTWTRNDGNNTWDNI
GTSLSRAIVPLKSQLTLGDTSTAGDIFDSVQMRGVQLTSDEEMLPDSQRGFAPVIRGIAK
SNAEVTVEQNNYVIYRTFVQPGAFEINDLYPTSNSGDLTVTIKESDGSEQKFVQPFSSVA
LLQREGHLKYSLSAGEYRAGNYNSAEPKFGQLDAMYGLPYGFTVYGGAIFSDDYYSLAGG
LGKNFGYIGAISIDVTQAKSKLANEENSEGQSYRFLYSKSFNSGTDFRLLGYKYSTSGYY
TFQEATDVRSDADSSYSQYHKRSQIQGNVTQQLGAWGSVYFNVTQQDYWNDEGKQRSLNA
GYNGRIGRVNYSVAYTWTKSPEWDESDRLLSFSMSIPLGRVWSNYHLTTDQHGRTNQQLG
VSGTALEDHNLNYSVQEGYGSNGVGNSGSVNLDYQGGVGSASLGYNYNRDGQQVNYGLRG
GVIAHSEGITLSQPLGESMAIISAPGARGAHVINNGGVEVDWMGNAVVPYLTPYRETEVS
LRSDSLNNQVDLDTASVNVVPTRGAIVRARFDTRVGYRVLMNLTQANGKAVPFGATATLL
DTTKESSSIVGEDGQLYISGMPEKGALQVNWGKDQAQQCRVAFTLPEQQDNTGVVMANAV
CR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgacatggacgcatcttcctctgggcaataagacctcgcgtttcacgcagtctgcgctt
gcgctgatgatagcgggtacgctccccgcgtatgcgggaacatttaacccgcgctttctg
gaggatgtgccgggtattgatcagcacgttgacctttcaatgtatgaatccaataaagct
gaacacctgccaggtaaataccgcgtctcggtggtggtcaacgaaaaaaaaatggagtct
cgcaccctggagtttaaggcagcgacagaggcgcagcgcgcaaaaatgggtgaatccctg
gtgccgtgcttaagccgcgtgcagcttgaagatatgggcgtgcgtattgatagcttcccg
gcgctgaaaatggccccgcctgaagcctgtgttgcttttgacgacattattccccaggcc
gccagccatttcgactttgcagaccagaccctgatcatgagcttcccgcaggctgcgatg
aagcagacagcgcgcggtacggtgccagaatcgcagtgggacgaaggggtgaatgccctg
ctggtggattataacttttccggcagcaacgccagctatgacgcacacgacagtgaaacc
agctacaacagcgacagctactatctgaatctgcgcagcggtatgaacctgggggcatgg
cggttacgtaactatagcacctggacgcgaaacgacggtaacaacacatgggataacatt
ggcacatccttaagccgtgccattgtaccgctgaaatcacagctgacgttgggggatacc
tccactgccggtgatatttttgacagcgttcagatgcgcggtgtgcagttaacttccgac
gaagagatgctgcctgacagccagcgcgggtttgcgcccgtcatccggggtattgccaaa
agtaacgccgaagttaccgttgagcagaacaactacgttatttaccgtacgtttgttcag
ccgggtgcgtttgaaattaacgacctgtatccaacctcaaacagcggcgacctgacggtc
accattaaagaatcggacggcagtgagcagaagttcgttcagccgttctcctcggtggcg
ctcctccagcgtgaaggccatctcaaatacagcctttccgccggggaataccgtgccggg
aactataacagcgccgagccgaaattcgggcagcttgatgccatgtacggcctgccgtat
ggctttaccgtttacggtggtgcgatcttctctgacgactattactcgctggcgggagga
ttaggtaaaaacttcggttatatcggcgcgatctccatcgatgtaacccaggcaaaaagc
aagctggcaaatgaggagaattcggaaggtcagtcttatcgtttcctctactccaagagc
tttaacagcggtacagatttccgtctgctgggttacaagtattcgaccagcggctattac
accttccaggaagcgacggatgtgcgcagcgatgcggacagctcttatagccagtaccac
aaacgtagtcagattcagggcaacgtgacgcagcaactgggcgcctggggctcggtctat
tttaacgtcacgcagcaggactactggaacgatgaaggtaaacagcgttcgctgaatgcc
ggttataacggccgtattggccgcgtgaactacagcgttgcttacacctggacgaaaagc
ccggagtgggatgagagcgatcgtttactgtcattctccatgtcgattccactgggacgc
gtgtggagtaactaccacctcacgaccgatcagcatggccgaaccaaccagcagttaggg
gtgagcggcaccgcgctggaagaccacaacctgaactatagtgtgcaggaaggctacggc
agcaacggcgtgggtaacagcggcagcgtgaacctggattaccagggcggcgtgggtagc
gccagcctgggttacaactacaaccgtgacggccagcaggtgaactacggtttgcgcggc
ggtgtgatagcccatagcgaaggtatcactctttctcaaccgctgggtgaatccatggcc
attatctccgcgccgggcgcgcgcggcgcgcacgtgatcaacaacggtggtgtggaagtg
gactggatgggtaatgcggtcgtaccttaccttactccgtaccgtgaaacggaagtctca
ctgcgaagcgacagcctgaacaaccaggttgacctggataccgcctccgtcaacgtagtg
ccgacacgcggcgcgattgttcgtgcccgcttcgatacccgagtgggctatcgtgtgctg
atgaatctgacgcaggccaatggcaaagcggtgccgtttggtgctaccgccacgctgctg
gataccacaaaagagtccagcagcattgtgggtgaagacggtcagctttatatcagcggg
atgccggagaaaggtgcccttcaggtgaactggggtaaagaccaggcacagcaatgccgc
gtggcgtttacgctgccggaacaacaggataataccggcgtggtgatggcgaatgccgtc
tgccggtaa
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