Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C37480
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Entry
STMDT12_C37480 CDS
T01742
Name
(GenBank) putative inner membrane protein
KO
K21449
trimeric autotransporter adhesin
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sem02000
]
STMDT12_C37480
Transporters [BR:
sem02000
]
Other transporters
Pores ion channels [TC:
1
]
STMDT12_C37480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
ESPR
BLOC1_2
ATG16
Motif
Other DBs
NCBI-ProteinID:
BAJ38691
LinkDB
All DBs
Position
3904124..3908509
Genome browser
AA seq
1461 aa
AA seq
DB search
MNRIFKVLWNAATGTFVVTSETAKSRGKKNGRRKLAVSALIGLSSIMVSADALANAGNDT
GDGVTPTGTQTGGKGWIAIGTDATANTYTNVDGASAAMGYKASAMGKWSTAIGSYSQSTG
DSSLALGVKSVSAGDRAIAMGASSSASGSYSMAMGVYANSSGAKSVALGYKSVASGATSS
ALGYQATASGDDSAAFGNGAKAIGTNSVALGSGSVAQEDNSVAVGNSTTQRQITYVAKGD
INSTSTDAVTGAQIYSLSQSVADRLGGGASVNSDGTVNAPLYEVGTGIYNNVGSALSALN
TSITNTEASVAGLAEDALLWDESISAFSASHTGNASKITNLAAGTLAADSTDAVNGSQLF
DTNEKVDKNTADIATNTGSINQNTADITANTDSINQNTTDIAANTTSINQNTTDIATNTT
NINSLSDSVTTLTDDALLWDAASGAFSAKHNGSDSKITNLAAGTLAADSTDAVNGSQLFD
TNEKVDQNTADITTNTNSINQNTTDIATNTTNINNLSDSITTLTDDALLWDAASGAFSAN
HNGSASKITNLAAGTLAADSTDAVNGSQLFATNENVSQNTADITTNTNSINQNTTDIATN
TTSINNLSDSITTLTDDALLWDAASGTFSASRSGSASKITNLAAGTLAADSTDAVNGSQL
YETNQKVDQNTSAIADINTSITNLSSDNLSWNETTSSFSASHGSSTTNKITNVAAGELSE
ESTDAVNGSQLFETNEKVDQNTTDIAANTTNITQNSTAIENLNTSVSDINTSITGLTDNA
LLWDEDTGAFSANHGGSTSKITNVAAGALSEDSTDAVNGSQLYETNQKVDQNTSAIADIN
TSITNLGTDALSWDDEEGAFSASHGTSGTNKITNVAAGEIASDSTDAVNGSQLYETNMLI
SQYNESISQLAGDTSETYITENGTGVKYIRTNDNGLEGQDAYATGNGATAVGYDAVASGA
GSLALGQNSSSSIEGSIALGSGSTSNRAITTGIRETSATSDGVVIGYNTTDRELLGALSL
GTDGESYRQITNVADGSEAQDAVTVRQLQNAIGAVTTTPTKYYHANSTEEDSLAVGTDSL
AMGAKTIVNADAGIGIGLNTLVMADAINGIAIGSNARANHANSIAMGNGSQTTRGAQTDY
TAYNMDTPQNSVGEFSVGSEDGQRQITNVAAGSADTDAVNVGQLKVTDAQVSRNTQSITN
LNTQVSNLDTRVTNIENGIGDIVTTGSTKYFKTNTDGADANAQGADSVAIGSGSIAAAEN
SVALGTNSVADEANTVSVGSSTQQRRITNVAAGVNNTDAVNVAQLKASEAGSVRYETNAD
GSVNYSVLNLGDGSGGTTRIGNVSAAVNDTDAVNYAQLKRSVEEANTYTDQKMGEMNSKI
KGVENKMSGGIASAMAMAGLPQAYAPGANMTSIAGGTFNGESAVAIGVSMVSESGGWVYK
LQGTSNSQGDYSAAIGAGFQW
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaatatttaaagtcctctggaatgccgctacgggaacatttgttgtcaccagc
gaaaccgcaaaaagccgcggcaaaaaaaacggccgcagaaagctggcagtttccgcactc
atcggtcttagcagcattatggtttctgcggatgcactggccaacgcaggaaacgataca
ggcgacggcgttactccaacgggtacccagactggaggaaaagggtggattgcaattggt
accgatgccacagccaatacttacaccaacgttgatggcgcaagcgccgcaatgggttat
aaagcctccgcgatggggaaatggagtaccgccattggttcctacagccagtccaccggc
gactcttcgttagcgcttggcgtaaaatcggtttcagccggtgaccgggccattgcaatg
ggcgcctcatcctcagccagtggaagttattcaatggcaatgggcgtgtatgccaattcg
agcggcgcaaaatcggttgcgttaggttataaatctgtcgcgagcggagcaacttcctct
gcattaggttatcaagctactgcgagcggcgacgacagcgctgcttttggtaatggcgca
aaagcgataggcaccaactcagttgcccttggctcgggctctgtcgcccaggaagacaat
tccgtcgccgtgggtaacagcaccactcagcggcagataacctacgttgctaaaggcgac
atcaattccaccagtaccgatgccgttacaggtgcgcaaatttattctttaagtcaatcc
gtcgccgaccgactcggcggaggggcttccgttaatagtgatggtacagtgaatgcgccc
ctctacgaggtaggcacaggcatctacaataacgtaggtagtgcattaagcgcacttaac
acgtctatcactaacacagaggcctctgtcgcaggattagccgaagacgcgctgttgtgg
gatgaaagcatcagcgcctttagcgctagccacacgggaaacgccagcaaaatcaccaat
ctggcggcgggtaccctggctgcggacagcaccgatgccgttaacggctctcagttgttt
gatacaaatgagaaagtggataagaacactgctgatatcgccaccaataccggcagcatc
aaccaaaacactgccgatattaccgctaataccgacagcattaaccagaacacaaccgat
atcgccgccaatacgaccagcatcaatcagaacaccactgatatcgccaccaacaccacc
aatatcaacagtctgagcgactccgtcaccacgctcaccgatgatgcactgctttgggat
gcagcctctggcgcattcagcgctaagcacaacggaagcgacagcaaaatcaccaatctg
gcggcgggtaccctggccgctgacagcaccgacgccgttaacggctcccagttgtttgat
acaaatgagaaagtggatcagaacaccgctgatatcaccaccaataccaacagcatcaat
cagaacaccactgatattgccaccaacaccaccaatatcaacaacctgagcgattccatc
accacgctcaccgatgatgccctgttgtgggatgcagcctctggcgcattcagcgctaac
cacaacggaagcgccagcaagatcacaaatctggcggcgggcaccctggccgcggacagc
accgatgcggtgaacggctcccagttgtttgccaccaacgaaaatgtgtctcagaacacc
gctgatatcaccaccaataccaacagcatcaatcagaacaccactgatattgccaccaac
accaccagtatcaacaacctgagcgattccatcaccacgctcaccgatgatgccctgtta
tgggatgcagcctctggcacattcagcgccagccgtagcggaagcgccagcaagatcacc
aatctggcggcgggcaccctggccgcggacagtacagacgcggtgaacggctcccagttg
tatgaaaccaaccagaaggtggatcaaaacacctctgctatcgcagatattaatacgtcc
atcaccaatcttagctctgacaacctgagctggaatgaaacaacgagttcgttctctgcc
agccacggaagtagtacgacaaacaaaatcaccaacgttgctgccggagagctgtctgaa
gaaagtaccgacgcggttaacggatcgcagttgttcgaaaccaatgaaaaagtggatcag
aacacgaccgatatcgccgccaataccaccaacatcactcagaacagcaccgcgattgag
aacctgaatacttctgtctccgacattaatacgtccattaccggcctcactgataacgct
ctgttatgggacgaagacaccggcgctttcagcgcaaaccacggtggaagcaccagtaaa
ataaccaatgtcgccgccggggcgctttctgaggacagtacagacgcggtaaacggatca
cagttgtatgaaaccaaccagaaggtggatcaaaacacctctgctatcgcggatatcaat
acgtccatcaccaaccttggtaccgatgcactgagctgggatgacgaagagggtgcgttc
agcgccagccacggtaccagcggtaccaataagataaccaatgtagcagcaggtgaaatc
gccagtgacagtactgacgccgttaatggctctcagctctatgaaactaacatgctgatt
tctcagtataatgaatctattagccaactagccggcgataccagcgaaacctatatcacg
gaaaatggtaccggcgtgaaatacatccgtacgaatgataacgggcttgaaggccaggat
gcatacgcaacgggtaacggcgcaacggcagtaggttacgacgccgtcgcctctggcgct
ggcagtctggctcttggccaaaacagcagcagcagcattgagggcagtatcgctttgggc
agtggctccacctctaaccgcgctattacaaccggtatacgagaaacgagcgcaacaagc
gatggcgtggtgattggctacaatacaacagacagagagttgctgggcgcgttgtcattg
gggacggatggagaaagctatcgtcaaattaccaacgttgctgacggctctgaagcgcaa
gatgcggtaacagttcgtcagttacaaaatgccattggtgcggtcactactacaccgacc
aagtactaccacgcaaactcaacggaagaagattcactggctgtcggaactgactcactg
gcaatgggtgcgaagaccatcgtcaatgctgatgcaggtattggtattggtctgaataca
ctggtgatggctgatgccatcaacgggattgctatcggttctaacgcacgcgccaatcat
gcaaacagtattgcaatgggtaatggttctcagaccactcgcggcgcacagactgactac
accgcctacaacatggacacaccgcagaactctgtcggtgagttctctgtcggcagtgaa
gacggccaacgtcagatcactaacgtcgcggcgggttcggcagataccgatgccgttaac
gttggtcaattgaaagtaacggacgcgcaggtttccaggaatacccagagcattactaac
ctgaatactcaggtatcgaatctggatacccgcgtcaccaatatcgaaaacggcattggc
gatatcgtcactaccggtagcaccaagtacttcaagaccaacaccgatggcgcagatgca
aatgcccagggtgcggacagcgtcgcgattggctctggctctattgctgccgctgaaaac
agcgtggcgttaggcacaaattccgtcgcagatgaagctaatactgtgtctgtcggctct
tctactcaacaacgccgtattaccaacgttgccgcaggggtgaacaacactgacgcggtt
aatgtggcgcaactgaaagcctcagaagcaggctccgtgcgttatgaaaccaatgcagat
ggctcggttaactacagtgtgctcaacctgggagacgggagtggcggtaccactcggatc
ggcaatgtttctgcggcggtgaatgatacggatgcggtgaactatgcgcaattgaaacgc
agcgtcgaagaagcaaacacttataccgaccaaaaaatgggtgaaatgaacagcaaaatc
aaaggcgtagaaaacaagatgagcggcggtatcgcctcagcgatggcgatggccggtctg
ccacaagcctacgccccgggcgccaacatgacctcgattgctggcggtacgtttaatggt
gaaagtgccgtcgccattggtgtctccatggtaagtgaaagcgggggctgggtgtataaa
ttgcaaggaaccagcaacagccagggcgattactctgcggccattggcgcgggcttccag
tggtaa
DBGET
integrated database retrieval system
