Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C37980
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Entry
STMDT12_C37980 CDS
T01742
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Pathway
sem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STMDT12_C37980 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sem03021
]
STMDT12_C37980 (rpoZ)
03400 DNA repair and recombination proteins [BR:
sem03400
]
STMDT12_C37980 (rpoZ)
Enzymes [BR:
sem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STMDT12_C37980 (rpoZ)
Transcription machinery [BR:
sem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STMDT12_C37980 (rpoZ)
DNA repair and recombination proteins [BR:
sem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STMDT12_C37980 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BAJ38741
LinkDB
All DBs
Position
3956672..3956947
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN
NQILDVRERQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctggta
ctggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccg
gaagaaaacgataaaactaccgttatcgcgctgcgcgaaatcgaagaaggtctgattaac
aaccagatcctcgacgtccgcgagcgccaggaacagcaagagcaggaagccgctgaatta
caagccgttaccgctattgctgaaggtcgtcgttaa
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