Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C40030
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Entry
STMDT12_C40030 CDS
T01742
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sem03016
]
STMDT12_C40030 (trmE)
Transfer RNA biogenesis [BR:
sem03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
STMDT12_C40030 (trmE)
Prokaryotic type
Methyltransferases
STMDT12_C40030 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
AIG1
ABC_tran
Roc
AAA_28
Arf
Gtr1_RagA
SRPRB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BAJ38946
LinkDB
All DBs
Position
4153325..4154689
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AA seq
454 aa
AA seq
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MSHNDTIVAQATPPGRGGVGILRISGLKARDVAQEVLGKLPKPRYADYLPFKDVDGSALD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGVRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNGVIADLDAVRTEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPADIWPDFIARLPKNLPITVVRNKADITGETLGISEVNGHSLVRLSAR
TGEGIDVLRNHLKQSMGFDTNMEGGFLARRRHLQALAEAAEHLEQGKAQLLGAWAGELLA
EELRLAQQSLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagccataacgacactatcgtcgcccaggcaaccccaccgggacgcggtggcgtgggt
atcctgcgtatttccggtctgaaggcgcgcgacgttgcgcaagaggtgctgggcaagctg
ccgaagccgcgctatgccgactacctgccgtttaaagatgttgacggcagcgcgctggat
cagggtattgcgctgtggttccccggcccgaactccttcaccggtgaagatgtgctggag
ctacaagggcacggcggtccggtgattctggacctgctgttaaaacgtatcctgacgctt
ccaggcgtgcgcattgcccgaccgggcgagttctccgagcgagcgttcctcaacgataag
ctcgatttagcccaggcggaagccattgccgacctgatcgatgccagttccgaacaggcg
gcgcgttcggcgctaaactcgttacagggggcattttccgcccgcgttaaccaccttgtg
gaagcacttactcacctgcgaatctacgtcgaagcggctattgattttccggatgaggag
atcgactttctctctgacggcaaaatcgaagcgcagctcaatggcgtcatcgccgatctt
gacgccgtgcgcaccgaagcgcgccagggcagcctgctgcgcgaagggatgaaggtagtg
attgccggacgcccgaatgccgggaaatccagcctgctgaatgcgctggcaggccgtgaa
gcggccattgtcaccgatatcgccggtaccacgcgcgacgtgttgcgcgagcatatccac
atcgacgggatgccgctgcatatcatcgataccgccggactgcgcgacgccagcgacgaa
gttgagcgtatcggcatcgaacgcgcctggcaggagattgaacaggccgatcgcgtgctg
tttatggtggatggcaccacgacggacgccgttgaccctgccgacatctggccggacttt
atcgcccgtctgcccaaaaatctaccgattaccgtggtacgtaacaaggcggatatcacc
ggcgaaacgttgggtattagtgaagtaaacggtcactcactggttcgcctctcggcgcgt
accggcgaaggcatcgacgtgttgcgtaaccacctcaagcaaagcatggggtttgatacc
aatatggaaggcggcttcctggcccgtcgccgtcacctacaggcgctggcggaagccgct
gaacaccttgagcagggcaaagcgcagctattaggcgcatgggcgggggaactgctggcg
gaagagttgcgcctggcgcagcaaagcttaagcgagattaccggcgagtttacctccgac
gacctgctgggacggattttctccagcttctgtatcggtaagtaa
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