Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C44620
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Entry
STMDT12_C44620 CDS
T01742
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Pathway
sem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STMDT12_C44620 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sem03019
]
STMDT12_C44620 (groEL)
03110 Chaperones and folding catalysts [BR:
sem03110
]
STMDT12_C44620 (groEL)
03029 Mitochondrial biogenesis [BR:
sem03029
]
STMDT12_C44620 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sem04147
]
STMDT12_C44620 (groEL)
Enzymes [BR:
sem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
STMDT12_C44620 (groEL)
Messenger RNA biogenesis [BR:
sem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
STMDT12_C44620 (groEL)
Chaperones and folding catalysts [BR:
sem03110
]
Heat shock proteins
HSP60 / Chaperonin
STMDT12_C44620 (groEL)
Mitochondrial biogenesis [BR:
sem03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
STMDT12_C44620 (groEL)
Exosome [BR:
sem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
STMDT12_C44620 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
STMDT12_C44620 (groEL)
Exosomal proteins of breast cancer cells
STMDT12_C44620 (groEL)
Exosomal proteins of colorectal cancer cells
STMDT12_C44620 (groEL)
Exosomal proteins of bladder cancer cells
STMDT12_C44620 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAJ39405
LinkDB
All DBs
Position
4672505..4674151
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKIADLKGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKSDAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtgaaagttaccctcggtccgaaaggccgtaacgtggttctg
gataaatctttcggtgcgccgactatcactaaagatggtgtttccgtagcgcgtgaaatc
gaactggaagacaagtttgaaaacatgggcgcgcaaatggtgaaagaagttgcctctaaa
gcgaacgatgctgcaggcgacggcaccaccaccgcgaccgtactggcgcagtccatcatt
accgaaggcttgaaagccgttgctgcgggcatgaacccgatggacctgaaacgtggtatc
gacaaagcggttgctgcggcggttgaagagctgaaagccctgtccgtaccgtgctccgac
tctaaagcgattgctcaggtaggtactatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgcggaagcgatggataaagtcggtaaagaaggcgtcatcaccgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagtttgaccgcggctacctg
tctccttacttcatcaacaagccggaaactggcgcagtagagctggaaagcccgttcatc
ctgctggctgataagaaaatctccaacatccgcgaaatgctgccggttctggaagccgtt
gcaaaagcaggcaaaccgctgctgatcatcgctgaagatgttgaaggcgaagcgctggct
accctggttgttaacaccatgcgtggcatcgtgaaagtggctgctgttaaggcacctggc
ttcggcgatcgtcgtaaggcgatgctgcaggatatcgctaccctgaccggcggtaccgta
atctctgaagagatcggtatggagctggaaaaagcaaccctggaagacctgggtcaggcg
aaacgtgttgtgatcaacaaagacaccaccaccatcatcgatggcgtgggtgaagaagct
gccatccagggccgtgttgctcagatccgtcagcagattgaagaagcgacctccgactac
gatcgtgaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgcggttatcaaa
gttggcgctgcgaccgaagttgaaatgaaagagaagaaagcccgcgttgaagatgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgctggtggtggcgttgcgctgatc
cgcgttgcttctaaaattgctgacctgaaaggccagaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcaatggaagctccgctgcgtcagatcgtgctgaactgcggcgaa
gagccgtctgttgtcgctaacaccgttaaaggcggcgacggtaactacggttacaacgca
gcaactgaagaatacggcaacatgatcgatatgggtatcctggacccaaccaaagttacc
cgttctgcgctgcagtacgctgcttctgtggctggtctgatgatcactaccgagtgcatg
gtgaccgacctgccgaaaagcgatgctcctgatttaggcgctgctggcggcatgggtggt
atgggtggtatgggcggcatgatgtaa
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