Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C44820
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Entry
STMDT12_C44820 CDS
T01742
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sem03019
]
STMDT12_C44820
03009 Ribosome biogenesis [BR:
sem03009
]
STMDT12_C44820
Messenger RNA biogenesis [BR:
sem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
STMDT12_C44820
Ribosome biogenesis [BR:
sem03009
]
Eukaryotic type
Pre-60S particles
RNases
STMDT12_C44820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAJ39425
NITE:
STMDT12_C44820
LinkDB
All DBs
Position
4692191..4692736
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AA seq
181 aa
AA seq
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MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDD
WNVRTHTGSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgatgaaaacaacctgatttggatcgatctggagatgacaggtctggacccc
gagcgcgatcgcattattgagatagccacactggtgacggatgccagcctgaacattctg
gcggaagggccgacgattgcggtacatcaatccgatgcgcaactggcgttaatggatgac
tggaacgtgcgcacccataccggtagcggcctggtagatcgcgttaaggcaagtacgatg
ggcgaacgagatgctgaactggcgacgattgaatttctgaaaacgtgggtgcctgcgggt
aagtcgccgatttgcggtaacagcatcggtcaggatcgtcgttttctgtttaaatatatg
ccggaactggaggcctacttccactatcgctatctggatgtcagtacgctcaaggaactg
gcgcgccgctggaagccggagattctggccggctttaccaagcagggcacgcaccaggcg
atggatgatattcgcgagtcggtggcggagctggcttactaccgcgagcatttcattaag
ctgtga
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