Sideroxyarcus emersonii: MIZ01_0116
Help
Entry
MIZ01_0116 CDS
T08108
Name
(GenBank) peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
seme
Sideroxyarcus emersonii
Pathway
seme00550
Peptidoglycan biosynthesis
seme01100
Metabolic pathways
seme01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
seme00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MIZ01_0116
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MIZ01_0116
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
seme01011
]
MIZ01_0116
Enzymes [BR:
seme01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MIZ01_0116
Peptidoglycan biosynthesis and degradation proteins [BR:
seme01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MIZ01_0116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BCK86362
UniProt:
A0AAN2BY46
LinkDB
All DBs
Position
126013..127911
Genome browser
AA seq
632 aa
AA seq
DB search
MNRYVELKNHQREIYYFRLRLVLSLGFVAVMLLILLLRFFYLQVFRHDYFHTLADSNRIY
VVPIVPNRGLILDRNGVVMAQNYSGYTLEIAPAKVTDMDALIAELSKLVEITPKDIKRFQ
KLLTERQTLETMPIRSQLSDEEVARISAQQFRFPGVEIKARLFREYPYTDQTSHLIGYVG
RINQKDIDQLEEDDAVSNYLGSDYIGKTGIEQSYERDLHGKTGFEQVEVDAGGRAVRVLS
RTAPQSGSNLMLTLDAKLQEVAENAFGEYRGALVALDPTNGEVLAFVSKPGYDPGLFIDG
IDTDTWDELNNSPDTPLNNRALRGQYPPGSTIKPFMALAGLYYGTRSPTRSISDPGYYLL
PGSRHQYRDWKAGGHGAVDMFKSIVISCDTYFYGLATEMGIDNMHSYLARFGFGQKTGLD
MEGETSGLLPSPEWKAKRYQQVWYPGDTVSAGIGQGYNLVTPVQLAFATAILANDGVAFQ
PHLVRETRPASGSPVLTMPKQLFDLKIDPANLKLVKSAMEAVTKPGGTAAVAGYGAPYRL
AGKTGTAQVIAIKQGEKYDAKKISEYNRDHAWFIAFAPADKPRIAMAVLVENGGHGGTTA
APIARKVMDYYLLGKIPQPLQTVTQKSGEQSD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttacgtcgagctgaagaaccatcagcgcgaaatctattatttccgtttgcgg
ttggtgttgagcctgggtttcgtggcagtgatgctgctcatcctgctgctgcgcttcttt
tacctgcaggtcttccgccacgactacttccacacgctggcggacagcaatcgcatctac
gtcgtgcccattgtgcccaaccgcggcctgatcctggaccgcaacggcgtggtgatggcg
cagaactattccggctacacgctggagatcgcgccggccaaggtgaccgacatggacgcg
ctgatcgccgaactttccaagctggtcgagatcacgcccaaggacatcaagcgcttccag
aaactgctgaccgaacggcagacgctggagaccatgccgatacgcagccagctgagcgac
gaggaagtggcgcgcatctcggcacagcagttccgattccccggcgtggagatcaaggcg
cgcctgttccgagaatatccgtacaccgaccagacctcgcacctgatcggctatgtcggc
cgcatcaaccagaaggacatcgaccagctggaagaggacgatgcggtatccaactacctc
ggctccgattacatcggcaagaccggcatcgagcagagctatgagagggatctgcatggc
aagaccggtttcgagcaggtcgaggtggatgccggcgggcgcgcggtgcgcgtgctgtcg
cgcaccgcgccgcaatccggcagcaacctgatgctgacgctggacgcgaagctgcaggaa
gtggcggagaatgcgttcggcgaatatcgcggtgcactggtggcgctcgatcccaccaat
ggcgaagtgctggccttcgtcagcaagccgggctacgacccgggcctgttcatcgacggc
atcgataccgacacctgggacgagttgaacaactcgcccgacacgccgctcaacaaccgc
gccctgcgcggccaatacccgcccggctcgaccatcaagcctttcatggcgctggcgggg
ctgtattacggcacgcgctcgcccacgcgcagcatcagcgatcccggctattacctgctg
cccggcagccggcaccaataccgcgactggaaggccggcgggcatggtgccgtcgacatg
ttcaaatccatcgtcatctcctgcgatacctacttctacggactcgccaccgagatgggc
atcgacaacatgcacagctacctggcgcgcttcggtttcgggcagaagaccggcctcgat
atggagggcgagacttccggcctgttgccttcgccagaatggaaagccaagcgttaccag
caggtttggtatccgggagataccgtctctgccggcatcggccagggctacaatctggtc
accccggtgcagctggcattcgccacggcgatcctggccaacgacggcgtggcgttccag
ccgcacctggtgcgggaaacgcgcccagccagcggcagcccggtgttgaccatgcccaag
cagttgttcgacctgaagatcgatcccgcaaacctcaagctggtgaaaagcgcgatggaa
gccgtcaccaaaccgggcggcacggcggcggtcgccggctacggcgctccctatcgcctg
gcgggcaagaccgggacggcgcaggtgatcgccatcaagcagggtgaaaaatacgacgcg
aagaagatctccgaatacaaccgcgaccatgcctggttcatcgcctttgcgccggccgac
aagccgcgcatcgcgatggcggtgctggtcgagaacggcggacacggcggcaccaccgcc
gcgccgatcgcgcgcaaggtgatggactattacctgctcggcaagataccgcagccgctg
cagacggtgacgcagaagagcggggagcagagcgactga
DBGET
integrated database retrieval system
