Sideroxyarcus emersonii: MIZ01_0399
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Entry
MIZ01_0399 CDS
T08108
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
seme
Sideroxyarcus emersonii
Pathway
seme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MIZ01_0399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seme03400
]
MIZ01_0399
Enzymes [BR:
seme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
MIZ01_0399
DNA repair and recombination proteins [BR:
seme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MIZ01_0399
RecFOR pathway proteins
MIZ01_0399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
BCK86635
UniProt:
A0AAN2BXZ7
LinkDB
All DBs
Position
416936..417454
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AA seq
172 aa
AA seq
DB search
MRILGIDPGLRITGFGVLDKQGQQLHYVASGCIKTPDGELPGRLKVILSSLGEVIARHKP
EQVAVEKVFVNVNPQSTLLLGQARGAAICAAVQADLPVAEYTALQVKQAVVGNGHADKEQ
VQAMVQRLLKLSGTPSPDAADALACAICHAHGGMGLGALATKGFRVRGGRLV
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcattttaggtattgaccccggcctgcgcatcacggggttcggtgtgctcgacaag
caaggccagcagttgcactacgttgccagcggttgcatcaagacgccggacggcgaattg
ccggggcgcttgaaagtgatcctcagttcgctgggcgaggtcatcgcccggcacaagccg
gagcaggtggcggtggaaaaggtgttcgtcaacgtcaacccgcagtccacgctgctgctc
ggccaggcgcgcggcgcggccatctgtgcagcggtgcaggcggatttgccggtggcggaa
tacaccgcgctgcaggtgaagcaggcggtggtcggcaacggccacgccgacaaggagcag
gtgcaggcgatggtgcagcgcctgctcaaactgtccggcacgcccagtccggatgcggcg
gatgcgctggcctgcgccatctgccatgcgcacggcggcatggggttgggggccttggcg
accaaggggtttcgtgtacggggggggagactggtatga
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