Sideroxyarcus emersonii: MIZ01_0648
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Entry
MIZ01_0648 CDS
T08108
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
seme
Sideroxyarcus emersonii
Brite
KEGG Orthology (KO) [BR:
seme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seme03400
]
MIZ01_0648
Enzymes [BR:
seme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MIZ01_0648
DNA repair and recombination proteins [BR:
seme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MIZ01_0648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_30
DUF3022
DUF1654
Motif
Other DBs
NCBI-ProteinID:
BCK86882
UniProt:
A0AAN1X960
LinkDB
All DBs
Position
669251..672553
Genome browser
AA seq
1100 aa
AA seq
DB search
MTGHIALDPKRSVVVEACAGSGKTWLLVSRIVRLLLDGAQPSQILAITFTRKAAQEMQAR
LQQWLRDLAMGDDDAVRRFLAERGVEEPDAAQLQRARSLYGSVLLAQPGITISTFHGWFM
QVMQRAPLNADVMQGMSLLERAGSEQEEAWEELLEQMRKQPDSPEAQNMQWLFGECGLSN
TRKLLFNFLAKRAEWWAYTQGADGMLTFALENLLDELAVDMDSDPVEAWHAHSDSRDALF
DFTRQLASGTDTQKKQASELEQAWTDSAQEERFERLWNLLFTAKGEPKALKPTKLQDQDA
HCRVRDVLQSRLQAVRDALAEQQAYRLNEAVLHCGIAFLERYQALKAQKQQMDFSDLEWQ
LCRLLQQSEHAETMQYKLDSRYRHVLLDEFQDTNPLQWQILRAWFDAAVAVETQPTVFVV
GDPKQSIYRFRRADARLFGVAREYLRAHFGAATLGNSLTRRNAQPVVDAVNAVFREQPDG
FEFVEHQTFQRDLPGHVMVLPLAAVEAKEEDAAESSALALRDPLTVKRAEAEDGARQQEA
EQLAAWLQTIVGDWAVSDGGEERRATYGDIMVLVRSRTHLQVYEEALRAKHIPFISSRRG
GLLDTLEAADIQALLMFLITPFADLALAQVLRTPIFACSDADLMRLSKNSTGFGVPSGEC
GAESVTQPPAPGARTSWWQCLQQLAEPSPALQRAAGLLRNWLALADKLPVHDLLDRVYFE
GEVIARYTAVLPPEMRAKVAANLNAFMEIALSVDAGRYPSLPRFLQELGELRDSPDDAPD
EGRLGTAGNAVRIYTVHESKGLEAPIVWLLDANADKKARDDHDVLLDWPLHAERPVHFSL
YADQASRGKKRAPLFEQDAAQQAREEMNLLYVAMTRAQQALIVSGSKGGRENKTQTWYER
IAAVVGQQETLNPLVLHTPADRGPMVHAPSHGLPPAGAARTENLPSVIPTGKRAARNTPQ
QQRGIWLHGLLQHLTEGMADKAELKQRLSIPAEEIESLWQQALHLLALPRLARFFDARQY
RNACNEMPYINAQGELKRIDRLVEFDDEVWVLDYKLGDSESTARYRAQMLEYQSAMQSVY
EGRQVRCALVFADGVLSEVV
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgaccggccacatcgccctcgatcccaagcgcagcgtcgtggtcgaggcctgcgccggc
agcggcaagacctggctgctggtgtcgcgtatcgtgcgcctgctgctggacggtgcgcag
ccgtcgcagatactggcgatcaccttcacgcgcaaggcggcgcaggagatgcaggcgagg
ctgcagcagtggctgcgcgacctggcgatgggcgacgacgatgcggtgcggcgtttcctg
gccgagcgcggcgtggaggaaccggacgccgcgcaactgcagcgcgcgcgcagcctgtac
ggcagcgtgctgctggcgcagccgggtatcaccatcagcaccttccacggctggttcatg
caggtcatgcagcgcgccccgctgaacgccgacgtgatgcaaggcatgagcctgctggag
cgtgcaggcagcgagcaggaagaagcctgggaagagctgctggaacagatgcgcaagcaa
ccggacagcccggaggcgcagaacatgcagtggctgtttggcgaatgcgggctgagcaac
acgcgcaaactgctgttcaacttcctcgccaagcgcgcggaatggtgggcctatacccag
ggggcggacgggatgctgacgttcgcactggagaacctgctcgacgagctcgcggtggac
atggacagcgatccggtcgaagcctggcatgcgcacagcgacagccgcgatgcgctgttc
gatttcacgcggcaactcgccagcgggaccgacacgcagaaaaagcaggcgagcgagctg
gagcaggcgtggaccgactcggcgcaggaagagcgtttcgagcggctgtggaatctgctg
ttcacggcaaagggcgagccgaaggcattgaagccgacaaaactgcaggatcaggatgcg
cattgccgtgtgcgggacgtgctgcagtcccgcctgcaggcggtgcgcgacgcgctcgcc
gagcagcaggcctatcgcctgaacgaggcggtgctgcattgcggcatcgccttcctcgag
cgctaccaggcattgaaggcgcaaaaacagcagatggacttttccgatctggaatggcag
ctgtgccgtctgctgcagcagagcgaacatgccgagaccatgcaatacaagctcgacagc
cgctatcgccatgtgctgctggacgagttccaggacaccaacccgctgcagtggcagatc
ctgcgcgcatggttcgatgctgccgtggcggtcgagacgcagcccaccgtgttcgtcgtg
ggcgaccccaagcaatccatctaccgcttccgccgcgccgatgcgcgcctgttcggcgtg
gcgcgcgaatacctcagggcgcatttcggcgcggcgacgctgggcaacagcctgacgcgc
cgcaatgcgcagcccgtggtggatgcggtgaatgccgtgttccgcgaacagcccgacggc
ttcgagtttgtcgagcatcagactttccagcgcgacctgcccggccatgtgatggtgttg
ccgctggctgccgtggaggcaaaggaagaggatgcggcagaaagcagcgcgcttgccctg
cgcgatccgctcactgtgaaaagggctgaagccgaagacggtgcgcgccagcaggaggcc
gaacagctggccgcgtggctgcagaccatcgtcggcgactgggctgtgagcgacggaggg
gaagagcggcgcgccacttacggcgacatcatggtgctggtgcgcagccgcacccacctg
caggtgtatgaagaggcattgcgcgcaaaacacattcccttcatcagttcgcgccgcggc
ggactgctcgatacgctggaggctgcggatatccaggcgctgctgatgttcctcatcacg
ccctttgccgacctggcgctggcgcaagtgctgcgcacgccgatctttgcctgcagcgat
gccgacctgatgcgactgtcgaagaacagtactgggttcggagtgccgagtggcgagtgt
ggcgcggagagcgttacgcagcccccggcgcccggcgctcgaacttcatggtggcaatgc
ctgcaacagcttgccgagccgtcgccggccctgcaacgcgctgccggcttgttgcggaac
tggcttgcgctggcagacaagctcccggtgcatgacctgctcgatcgcgtctatttcgag
ggcgaggtgatcgcgcgctacaccgccgtgctgccacccgagatgcgcgccaaggtcgcc
gccaacctcaatgcgttcatggagatagcgttgagcgtggatgcgggccgctatcccagc
ctgccgcgcttcctgcaggaactgggcgaactgcgcgacagccccgacgacgcgccggac
gaaggcaggctcggcacggccggcaacgcggtacgcatctataccgtgcacgaatcgaag
gggctggaagcgcccatcgtctggctgctggatgcgaatgcggacaagaaagccagggac
gaccacgatgtgctgctcgactggccgctacatgccgagcggcccgtacatttctcgctc
tatgccgaccaggcttcgcgcggcaagaaacgcgcgccgctgttcgagcaggacgcagca
cagcaggcgcgcgaagaaatgaacctgctctatgtcgccatgacccgcgcgcagcaggcg
ttgattgtcagtggcagcaagggaggcagggagaacaagacgcagacctggtatgaacgc
attgcggcggtggttggccagcaggaaacattgaacccgctcgtcctgcacacgccggca
gatcgtggccctatggtgcatgcgcccagccatggcctgccccctgcgggtgcagcccga
acggaaaatcttccgtccgtcatacccaccgggaaacgcgctgcccgcaatacaccgcaa
caacagcgcggcatctggctgcacggcttgctgcaacatctgacggaaggcatggcggac
aaggcagaactgaaacagcgcctctccatccccgccgaagagatcgagtcactctggcag
caagccctgcatctgctcgcgctgccccggctcgcgcgcttcttcgatgcccggcaatac
cgcaatgcctgcaacgagatgccctacatcaatgcgcagggcgagcttaagcgcatcgac
cgcctggtggaattcgatgatgaggtgtgggtgctggattacaagctgggcgatagcgaa
agcacggcacgctaccgtgcgcagatgctggaatatcaatcggcaatgcaatcggtgtat
gaaggcaggcaggtgcgctgcgcgctggtgttcgcggatggggttctgagcgaagtggtg
taa
DBGET
integrated database retrieval system
