Sideroxyarcus emersonii: MIZ01_0699
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Entry
MIZ01_0699 CDS
T08108
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
seme
Sideroxyarcus emersonii
Pathway
seme03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
seme00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MIZ01_0699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seme03021
]
MIZ01_0699
03400 DNA repair and recombination proteins [BR:
seme03400
]
MIZ01_0699
Enzymes [BR:
seme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MIZ01_0699
Transcription machinery [BR:
seme03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MIZ01_0699
DNA repair and recombination proteins [BR:
seme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MIZ01_0699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
BCK86929
UniProt:
A0AAN1X905
LinkDB
All DBs
Position
714650..718867
Genome browser
AA seq
1405 aa
AA seq
DB search
MKALLDLFKQVTQKEEFDTIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVTEPGMTPLNRGQLLSEDDYLAKLEEYGDEFSAVM
GAEGVRALLRALDVPAEVEKLRAELEATSSETKIKKYAKRLKVLEAFMQSGIKPEWMVME
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKKMALELFKPFIFERLEKMGLATTIKAGKRMVEAEEPIVWDILEEVIHEHP
VMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTREKVGALGEGSIYADVAEVLRAYRSN
QVDLQAKVVVRIKEVITNEAGERQDKQTRYETTVGRAILSEILPPNLPFSTVNKALKKKE
ISRLINTSFRRCGLRDTVIMADQLMYTGFAYATRAGISICVDDMLVPQQKNELIAAAEKE
VHEIQTQYTSGLVTQGERYNKVVDIWGRTGDQVAKAMMDQLGVEPVRDLATGEIVVDKKG
KAVTQESFNSIYMMADSGARGSAAQIRQLSGMRGLMAKPDGSIIETPITANFREGLNMLQ
YFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVITENDCGTTNGRSMKALVEGGEV
IEALRERILGRVVAADVVNPETGETLYEAGTLLNEDKVEQIESLGIDEVRVRTPLTCDTR
YGLCSKCYGRDLGRGGLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTVVASQVE
SKSNGVIKYSPNMRTVTTARGELVVVARSGEVLVTDDHGRERERHKVPYGANLTEREGKT
VRAGEILATWDPHTRPIITEYAGRIRFENVEEGATVAKQIDEVTGLSTLVVIDPKRSTTG
KGVRPLVRLLDDAGHEIKIAGTDTPISVTFQVGSIITVEDGQHVGVGDVLARIPQESSKT
RDITGGLPRVAELFEARSPKDAGMLAEVTGTASFGKETKGKQRLVITDTTGEAHEFLITK
DKHVLVHDGQVVNQGEMIVDGPADPHDILRLLGIEALAQYITDEVQDVYRLQGVKINDKH
IEVIVRQMLRRVQIIDEGDTTFIPKEQVERAELLQENERVAAEGKQPATYQHMLLGITKA
SLSTDSFISAASFQETTRVLTEAAIMGKKDDLRGLKENVIVGRLIPAGTGLAYHTARRKQ
RLGLDIAEGAGLAELAAAAETQEGA
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgctcgatctattcaagcaggtcacacagaaggaagagttcgacacgatc
aagatcggtctggcctctcccgagaagatccgttcgtggtcctacggcgaagtgaagaag
ccggagaccatcaactaccgtaccttcaagccggagcgcgacggcctgttctgcgccaag
atcttcggcccggtgaaggactacgagtgcctgtgcggaaagtacaagcgcctgaagcac
cgcggcgtcatttgcgaaaagtgcggtgtcgaagtcacgctgtccaaggtgcgccgcgag
cgcatgggccacatcgagctggcctcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcccgtctcggcatggtgctggacatgaccctgcgcgacatcgagcgcgtgctgtat
tttgaagcctatgtcgtgaccgagcccggcatgactccgctgaaccgcggccagttgctg
tccgaggatgattacctcgccaagctggaagagtacggcgacgaattctccgccgtgatg
ggtgcggaaggcgtgcgtgcgttgctgcgcgcactggatgtgccggctgaagtcgagaag
ctgcgcgccgaactggaagcaaccagctccgagaccaagatcaagaaatacgccaagcgc
ctgaaggtgctggaagcgttcatgcagtccggcatcaagccggaatggatggtgatggaa
gtgttgccggtgttgccgccggaactgcgtccgctggtgccgctggatggcggtcgcttc
gcgacctccgacctgaatgacctgtatcgtcgcgtcatcaaccgtaacaaccgcctgaag
cgcctgctggagctgaaggcccccgagatcatcgtgcgcaacgagaagcgcatgctgcag
gagtcggtggactcgctgctggacaacggccgtcgcggcaaggcgatgaccggcgccaac
aagcgtccgctgaagtcgctggcggacatgatcaagggcaagggcggccgtttccgccag
aacctgctgggcaagcgcgttgactactccggccgttccgtgatcgtggtgggtccgcaa
ctcaagctgcaccagtgcggcctccccaagaagatggcgctggagttgttcaagccgttc
atcttcgaacgcctggaaaagatgggcctcgcaaccacgatcaaggccggcaagcgcatg
gtcgaggcggaagagcctatcgtgtgggacatcctggaagaggtcattcacgaacacccg
gtgatgctgaaccgtgcgccgacgctgcaccgtctgggtatccaggcattcgagcccatc
ctgatcgaaggcaaggccatccagttgcatccgctggtctgctcggcattcaacgccgac
ttcgacggtgaccagatggccgtgcacgtgccgctgtcgctggaagcgcagatggaagcg
cgcaccctgatgctggcttccaacaacgtcctgtcgcccgccaacggcgagccgatcatc
gtgccgtcgcaggatatcgtgctgggtctgtactacatgacgcgcgagaaggtcggtgcg
ctgggtgaaggctccatctatgccgatgtggccgaggttctgcgtgcctatcgttccaac
caggtcgatctgcaggccaaggtggtggtgcgcatcaaggaggtgatcaccaacgaggcg
ggcgaaaggcaggacaagcagacgcgttacgagacgacggtcggccgcgccatcctgtcc
gaaatcctgccgcccaacctgccattcagcacggtgaacaaggcgctgaagaagaaggag
atttcgcgcctgatcaataccagcttccgccgttgcggcctgcgcgacacggtgatcatg
gccgaccagttgatgtataccggctttgcctatgcgacccgcgcgggcatctcgatctgt
gtggacgatatgctggtgccgcaacagaagaacgaattgatcgcagcggccgagaaggaa
gtgcacgagatccagacccagtacacctccggtctggtgacccagggcgaacgctacaac
aaggtggtggatatctggggccgtaccggcgaccaggtcgccaaggccatgatggaccag
ctcggcgtagaaccggtgcgcgatctggcaacgggcgagatcgtcgtggacaagaagggc
aaggcggtgacgcaggagtccttcaactccatctacatgatggccgactccggcgcacgc
ggctctgcagcgcagattcgccagctgtccggcatgcgcggcctgatggcgaagccggat
ggctccatcatcgagacgccgatcacagcgaacttccgcgaaggactgaacatgctgcag
tacttcatctccacgcacggtgcgcgtaagggcctggcggatacggcgttgaagacggcg
aactccggttacctgacgcgtcgtctggtggatgtgacgcaggatctggtgatcaccgaa
aacgattgcggcacgaccaatggccgttcgatgaaggcgctggtcgagggcggtgaagtg
atcgaagccctgcgcgagcgtatcctcggtcgtgtggtggctgccgatgtggtcaatcct
gagactggcgaaaccttgtacgaagccggcactttgctgaacgaagacaaggtcgagcag
atcgagtcgcttggtatcgacgaggtgcgcgtgcgcactccgctgacctgcgatacgcgc
tacggtctgtgctccaagtgttacggccgcgatctgggtcgaggcggtctggtgaacgtg
ggcgaagctgtcggcgtgatcgccgcgcagtccatcggcgaaccgggcacccagctgacc
atgcgcactttccacatcggtggcgcggcatcgcgtaccgtggtggcaagccaggtcgag
agcaagtccaacggtgtgatcaagtacagcccgaacatgcgtaccgtgaccacggcgcgt
ggcgaactggtggtggtggcgcgttccggcgaagtgctggtgacggacgaccatggccgc
gagcgcgagcgtcacaaggtgccgtacggcgccaacctgaccgagcgcgaaggcaagact
gtgcgcgcgggcgagatcctggcgacctgggatccgcatacccgtccgatcattaccgaa
tatgctgggcgcatccgtttcgagaacgtggaagagggcgcaactgttgccaagcagatc
gatgaagtgaccggtctgtccaccctggtggtaatcgatcccaagcgatccaccaccggc
aagggcgtacgcccgctggtgcgtttgctggatgatgcaggccacgagatcaagatcgcc
ggaacggatacgccgatctcggtgaccttccaggtcggctccatcattacagtggaagac
gggcagcatgtgggcgttggtgatgtgctggcgcgcatcccgcaggagagctcgaagacg
cgcgacatcaccggcggtctgccgcgtgtggccgaactgttcgaggcgcgttcgccgaag
gatgcgggcatgctggctgaagtcaccggcacggcttcgttcggcaaggaaaccaagggc
aagcagcgcctggtgattaccgataccaccggagaagcgcatgaattcctgatcacgaag
gacaagcatgtgctggtgcacgacggtcaggtggtcaatcagggcgaaatgatcgtggac
ggtccggccgatccgcacgacatcctgcgtttgctgggtatcgaggcgttggcgcagtac
attaccgacgaggtgcaggacgtgtatcgcttgcaaggcgtgaagatcaacgacaagcac
atcgaagtgatcgtgcgccagatgctgcgtcgcgtacagatcatcgacgagggcgacacc
actttcattccgaaggaacaggttgagcgtgccgaactgttgcaggaaaacgagcgtgtg
gccgcggaaggcaagcagccggccacctaccagcacatgctgctgggtatcaccaaagca
tcgctgtccacggattcgttcatctccgccgcctccttccaggagacgacgcgtgtgctg
accgaggcggcgatcatgggcaagaaggacgatttgcgcggtctcaaggagaacgtcatc
gtgggccgcctcatcccggcaggtacgggcctggcttaccacacggcacgccgcaagcaa
cgcctggggctggacatcgccgaaggtgcgggtttggccgaattggcggcagcagcggag
acgcaagagggcgcctaa
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integrated database retrieval system
