Sideroxyarcus emersonii: MIZ01_0731
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Entry
MIZ01_0731 CDS
T08108
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
seme
Sideroxyarcus emersonii
Pathway
seme03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
seme00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MIZ01_0731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seme03021
]
MIZ01_0731
03400 DNA repair and recombination proteins [BR:
seme03400
]
MIZ01_0731
Enzymes [BR:
seme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MIZ01_0731
Transcription machinery [BR:
seme03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MIZ01_0731
DNA repair and recombination proteins [BR:
seme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MIZ01_0731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BCK86961
UniProt:
A0AAN2BYF0
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All DBs
Position
735700..736668
Genome browser
AA seq
322 aa
AA seq
DB search
MSNNLLKPRIIDVQRISATQARVVMEPFERGYGHTLGNALRRVLLSSMPGYAVTEVKIAG
VLHEYSSIDGVQEDVVEILLNLKGLVLKLHNAREATLHLRKSGAGVVTAADIEVGADTEV
INPNHVIAHLAAGGKLDMEIKVEQGRGYVSAISRMQPGATRPVGHIALDASFSPVSRVSY
AVESARVEQRTDLDKLIMDIETNSAIDPEEAIRYAARILVDQLSVFAALEGTPAPVEKPQ
APKVDPMLLRPVDDLELTPRSSNCLKAQSIHYIGDLIQNTEADLLRTPNLGRKSLNEIKQ
VLAEHGLSLGMKLENWTAMSEK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatttgttgaaacctcgcatcattgatgttcagcgcatctctgccacccag
gcgcgggttgtgatggagccgttcgagcgcggctatggccacaccttgggcaatgccctg
cgtcgtgtcctgctgtcttccatgccaggctatgcggtgacggaagtcaagatcgcgggt
gtgttgcacgaatactcatccatcgacggcgtgcaggaagacgtagtcgagatcctgctg
aacctgaaggggttggtgctcaagctgcacaatgcgcgcgaagcgaccttgcatctgcgc
aagtccggtgcgggtgtggtcactgctgcggacatcgaagtgggtgccgacactgaagtt
atcaatccgaaccatgtcatcgcacatctggctgccggcggcaagctggatatggaaatc
aaggtcgaacaaggccgcggctatgtatccgctatttcgcgcatgcagcctggcgcaacc
cgcccggtcggccatatcgctcttgacgcttcgttcagcccggtttcccgcgtgagctac
gctgttgaaagcgcgcgtgtcgaacaacgtaccgatctggacaagctgatcatggacatc
gagaccaacagcgccatcgatccggaagaagcaatccgctatgccgcgcgcatcctggtt
gaccagctttccgtgttcgctgctctggaaggtacaccggctccggtcgaaaagccgcaa
gctcctaaggtcgatccgatgctgttgcgcccggtcgacgatttggaactgaccccgcgt
tcttccaactgcctgaaggcacagagcatccattacatcggcgacctgattcagaacacc
gaagcagatctgttgcgtaccccgaacctgggccgcaaatcgctcaatgaaatcaagcaa
gtgctggcagaacacggcctgtcgctgggcatgaagttggaaaactggacggcaatgtcc
gagaaataa
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