Sideroxyarcus emersonii: MIZ01_0886
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Entry
MIZ01_0886 CDS
T08108
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
seme
Sideroxyarcus emersonii
Pathway
seme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MIZ01_0886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seme03019
]
MIZ01_0886
Enzymes [BR:
seme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MIZ01_0886
Messenger RNA biogenesis [BR:
seme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MIZ01_0886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
BCK87116
UniProt:
A0AAN1X8Z6
LinkDB
All DBs
Position
886472..887815
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AA seq
447 aa
AA seq
DB search
MIKRLIKRVFGKTVPARTAGSAHVIPYEIHKVSRDGISYGARRVTDGLQAAGFKAFVVGG
AVRDLLLNRQPKDFDVATDATPEEVKRVFRRARIIGRRFRLVHVMFGEETVEVSTFRRAI
DAEDAETDEHGRILRDNEFGDQEQDAARRDFTANALFYDPATQEIFDYHRGYEDIRANTL
RMIGDPEVRYREDPVRMLRAVRLSAKLGMKLDPSTAAPISKMKELLSNVPEARLFDEMLK
LLLSGHAMPCIKKLRAMELHHGMLPMLDVILEQPLGEKFVMLALQSTDQRIAEEKPASPA
FLFAALLWHEVLAAWKGRQEAGERPVAAMHAAMDEVLDRQRAQLAIPRRYDTVMKELWLL
QPRFEQRGGQRPFRLLALPRFRAAYDFLMLRCESGEVDAGLGAWWEEFQHAGDERRAEML
QPDSDGPKKRRRRSKKPAAVQAELPID
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagactgatcaagcgggtgttcggcaagactgttccggcgcgtacggcgggc
tcggcgcatgtgattccatatgagatacataaggttagccgggatggcatcagctacggc
gcgcgccgcgtgaccgacggcttgcaggccgccggattcaaggcatttgtggtcggcggc
gcggtgcgcgacctgttgctgaaccgccagcccaaggatttcgatgtcgccaccgatgcc
acgccggaggaggtgaaacgggtgttccgtcgcgcgcgcatcatcggccggcgtttccgc
ctggtgcatgtgatgttcggcgaggagacggtggaggtttccaccttccggcgcgctatc
gatgcggaagatgcggaaaccgacgagcatggacgtatcctgcgcgacaacgaattcggc
gaccaggagcaggacgcggcacggcgcgacttcaccgccaatgcgctgttctacgatccc
gccacgcaggagatattcgattaccaccgcggctacgaagacatccgcgccaacaccctg
cgcatgatcggcgacccggaagtgcgttaccgcgaggatccggtgcgcatgctgcgcgcg
gtacgtctttccgccaaactgggcatgaagctggatccgtccaccgcggcaccgatctcg
aaaatgaaggaattgttgagcaacgtgccggaagcgcgcctgttcgacgagatgctcaag
ctgctgctgtccggacacgccatgccctgcatcaagaaactgcgcgcgatggaactgcac
cacggcatgctgccgatgctggacgtgattctggaacagccgctgggcgagaaattcgtc
atgctggcgctgcaaagcaccgatcagcgcattgccgaagagaaaccggcatcgcccgcc
ttcctgtttgccgccttgttgtggcacgaggtgctggcggcctggaagggccggcaggaa
gccggcgagcgcccggtggcagcgatgcatgcggcgatggatgaggtgttggacaggcag
cgcgcgcagcttgccattccgcgccggtacgacacggtgatgaaggagctatggctgctg
cagccccgtttcgagcagcgcggcgggcagcgccccttccggctgctggcattgccgcgc
ttccgcgccgcctacgatttcctgatgttgcgctgcgagagcggcgaggtggatgcagga
ctgggggcatggtgggaagaattccagcatgccggcgacgagcgccgcgccgagatgctg
cagccagacagcgacggacccaagaaacgccgccgccgcagcaagaaacctgctgctgta
caggcggaattgcccatagactga
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