Sideroxyarcus emersonii: MIZ01_1713
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Entry
MIZ01_1713 CDS
T08108
Name
(GenBank) holliday junction ATP-dependent DNA helicase RuvB
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
seme
Sideroxyarcus emersonii
Pathway
seme03030
DNA replication
seme03430
Mismatch repair
seme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MIZ01_1713
03430 Mismatch repair
MIZ01_1713
03440 Homologous recombination
MIZ01_1713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seme03032
]
MIZ01_1713
03400 DNA repair and recombination proteins [BR:
seme03400
]
MIZ01_1713
Enzymes [BR:
seme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MIZ01_1713
DNA replication proteins [BR:
seme03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MIZ01_1713
DNA repair and recombination proteins [BR:
seme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MIZ01_1713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
AAA_16
RuvB_N
AAA_22
AAA_14
AAA_5
AAA_30
PIF1
ResIII
AAA_7
AAA_18
AAA_19
TniB
TsaE
Rad17
nSTAND3
AAA_assoc_2
Mg_chelatase
RCF1-5-like_lid
AAA_24
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
BCK87916
UniProt:
A0AAN1XAX6
LinkDB
All DBs
Position
complement(1724616..1726217)
Genome browser
AA seq
533 aa
AA seq
DB search
MSATSVLARKWRPRSFAQLAGQEHVVQALTNALTQNRLHHAYLFTGTRGVGKTTIARIFA
KSLNCETGVTPAPCGVCSACTEIDSGRFVDLIELDAASNTQVDNMRELLESALYAPTSGR
FKVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQLP
PALINTHLQYVLEQEGIPFENGALNLVARAAQGSMRDALSLMDQAIAYSSGKVDEALVRT
MLGAIDQGYLFDLLQTLRAGDGAGLLRIADDMAMRSLAFEAALQDMATLLHRIALAQTIP
QAIPDDEPERARLFELAQQYTPEEIQLNYQIAIHGRNEIDLAPDEYAGFTMTLLRMLAFA
PQGAAAGAGPAAPRTSAVTPGATRHVAAEPAPVRQEAAPVRNVAGTADLDWNTLLSQLNL
QGMARELAKNSVLASFSDDRMVLSLAPQYKHLQGNKLAQDKLQAALSDYFVKPVRLAVEL
AAVKDVATPAAVEQHEKQTRQQQAEEAIRHDAFVREAQAHLGAQVIEGSIRPV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctacctcggttctagcgcgcaaatggcgccccagaagtttcgcccagctggcg
gggcaggagcacgtcgtacaggcgctgaccaatgcgctgacgcagaaccggctgcaccat
gcctatcttttcaccggcacgcgtggtgtgggcaagaccaccatcgcgcgcatctttgcc
aaatccctgaattgcgaaaccggtgtcacgcctgcaccctgcggcgtgtgcagcgcctgc
accgagatcgacagcggacgtttcgtcgacctgatcgagctggatgcggcctcgaacacg
caggtcgacaacatgcgggagctgctggagagtgcgctgtatgcgccaaccagcgggcgc
ttcaaggtgtacatcatcgacgaagtgcacatgctgtccaaatcggccttcaatgcgatg
ctgaagacgctggaagagccgccggcgcatgtgaagttcatcctcgccactaccgatccg
cagaagatcccggtcactgtgctgtcgcgctgcctgcagttcaatctcaagcaactgccg
ccggcgttgatcaatacccacctgcaatacgtgctggagcaggaggggatcccgttcgag
aacggcgcactgaatctggtggcgcgcgccgcgcaaggcagcatgcgcgatgcgctgagc
ctgatggaccaggccatcgcctattcttccggcaaggtggacgaagcgctggtgcgcacc
atgctcggggcgatcgaccaaggctatctgttcgatctgctgcagactttgcgggcgggc
gacggcgctggcctgttgcgcattgccgacgatatggccatgcgcagcctggcgttcgag
gcggctttgcaggatatggcgacattgctgcatcgcatcgcgctggcgcagaccattccg
caggcgataccggatgatgagccggagcgggcgcgcctgtttgaactggcgcagcagtac
acgccggaagagatccagctgaactatcagatcgccatccacgggcgcaacgagatcgat
ctggccccggacgaatacgccggattcaccatgacgctgttgcgcatgctggcttttgcg
ccgcagggggcggcggcaggtgccgggccggcggcgccgcggacctccgcggtgacgccg
ggcgcaaccaggcacgtcgccgcagaacccgctccggtcaggcaggaggctgctccggtg
cggaatgtggcaggtaccgccgacctggactggaacacattgctgtcgcaactcaacctg
caaggcatggcgcgcgaactggcgaagaacagcgtactggcgagcttttcggatgaccgt
atggtgctgagcctggcgcctcagtacaagcatctgcagggcaacaagctggcacaggac
aagctgcaggcggcattgagcgattatttcgtcaagccggtcaggctggccgtggaactg
gctgcggtaaaggatgtcgcaacccccgctgcggtggagcagcatgagaaacagacgcgc
cagcagcaggctgaagaggcgatcaggcatgatgcgttcgtgcgtgaggcgcaagcgcat
ctgggggcgcaggtgatcgaagggtccatcagacccgtttaa
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