Sideroxyarcus emersonii: MIZ01_2577
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Entry
MIZ01_2577 CDS
T08108
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
seme
Sideroxyarcus emersonii
Pathway
seme03420
Nucleotide excision repair
seme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
seme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MIZ01_2577
03430 Mismatch repair
MIZ01_2577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seme03400
]
MIZ01_2577
Enzymes [BR:
seme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MIZ01_2577
DNA repair and recombination proteins [BR:
seme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MIZ01_2577
MMR (mismatch excision repair)
Other MMR factors
MIZ01_2577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BCK88771
UniProt:
A0AAN1XCL1
LinkDB
All DBs
Position
complement(2584379..2586544)
Genome browser
AA seq
721 aa
AA seq
DB search
MNSTLLAGLNPEQRAAVELPARSALILAGAGSGKTRVLTTRIAWLISTGQVSPAGILAVT
FTNKAAKEMVTRLSAMLPINTRGMWIGTFHGLCNRMLRAHHREASLPQTFQILDSGDQLS
AIKRLMKAMNIDDEKYPPREMQNFISGRKEEGLRAHEVEAYDPYTRRKIEVYAEYDKQCQ
REGVVDFSELLLRCYELLSRNQALREHYQERFKHILVDEFQDTNPLQYRWLKLLAGQNNA
LFAVGDDDQSIYAFRGANVGNMQELLRDFHVENVIKLEQNYRSHGNILDAANALIQHNRN
RLGKNLWTDADKGEQIRVYEAGTDVDEAAFIVDEARQLNREGVRLSEIALLYRSNAQSRV
LEHALVSAGLSYRVYGGLRFFERQEIKHALAYLRLMENTDDDNALLRIVNFPTRGIGARS
IEQLQEAAKQYNTTLWDAAARAGGKVTAFVGLVESLRSATAGLPLPEIIDHVLQHSGLAA
HYQNETGAKKREAEERLENLNELVNAATLFVHENEDDSLTAFLTHASLEAGEHQAGDSED
ALHLMTVHAAKGLEFHTVFITGLEESLFPHQNSIDSGDLDEERRLMYVAITRARRRLYLT
FAQSRMLHGQTHYGTASSFLRELPEELLHWLTPRVSARKTFSSGSYETSSYIKAFAATPL
EKAPPAPSSVWRIGQRVFHQKFGEGVVTDSEGGGNEGRVQVNFKRAGSKWLALEYAKLTA
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaattccaccctgcttgccggtctcaatcccgaacaacgcgccgccgtcgaactgcct
gcccgatccgcactgattctcgcaggtgcgggcagcggcaaaacgcgcgtgctgaccacg
cgcatcgcctggctgatcagcaccgggcaggtgtcgcccgccggcatcctggccgtgacc
ttcaccaacaaggcggccaaggagatggtgacgcggctgtcggcgatgctgccgatcaac
acccgcggcatgtggatcggcaccttccacgggctgtgcaaccgcatgctgcgcgcgcac
caccgcgaggccagcctgccgcagaccttccagatcctcgattccggcgaccagctgtcc
gccatcaaacgcctgatgaaagcgatgaacatcgacgacgagaaatatccgccgcgcgaa
atgcagaacttcatcagcggccgcaaggaagaaggcttgcgtgcccacgaagtggaagcc
tacgacccctacacgcggcgcaagatcgaggtgtacgccgaatacgacaagcagtgccag
cgcgagggcgtggtggacttctccgagctgctgctgcgctgctacgaactgctgtcgcgt
aaccaggcgctgcgcgagcactatcaggagcgcttcaagcacatcctggtggacgagttc
caggacaccaacccgctgcaataccgctggctgaaattgctggccggccagaacaatgcg
ctgttcgccgtgggcgacgacgaccagtccatctacgccttccgcggcgccaacgtcggc
aacatgcaggagctgctgcgcgacttccatgtcgagaacgtgatcaagctggagcagaac
taccgctcgcacggcaacatcctcgacgccgccaacgcgctgatccagcacaaccgcaac
cgcctcggcaagaacctgtggaccgatgccgacaagggcgaacagatccgcgtgtacgag
gcgggcaccgatgtggacgaggcggcgttcatcgtcgatgaggccaggcagctcaaccgc
gaaggcgtgaggctgtccgagatcgcactgctgtaccgctccaacgcgcagtcgcgcgtg
ctggagcatgcgctggtctcggccgggctgtcataccgcgtgtatggcgggctgcgcttc
ttcgagcggcaggagatcaagcatgcgctggcctatttgcggctgatggagaacaccgac
gacgacaatgcgctgctgcgcatcgtcaacttccccacccgcggcatcggcgcgcgcagc
atcgagcagctgcaggaagcggcaaagcaatacaacaccacgctgtgggacgccgccgcg
cgcgcgggcggcaaggtcaccgccttcgtcggcctggtcgaatcgctgcgcagcgcaacg
gccggtctgccgctgccggagatcatcgaccatgtgctgcagcatagcggtttggcggcg
cattaccagaacgagaccggtgcgaagaagcgcgaagccgaggagcggctggagaacttg
aacgagctggtcaatgcagcgacgctgttcgtgcacgagaacgaggacgacagcctcact
gccttccttacccatgcttcgctggaagcgggcgagcaccaggcaggcgacagcgaagac
gcgctgcacctgatgacggtgcatgccgcgaaagggctggagttccacaccgtgttcatc
accggcctggaagagagcctgttcccgcaccagaacagcatcgacagcggcgacctcgac
gaggaacgccgcctgatgtatgtggcgatcacccgcgcgcgccgccgcctgtacctcact
ttcgcgcagagccgcatgctgcacgggcagacgcactacggcacggcatcgagcttcctg
cgcgaactgccggaagagctgctgcactggctgacgccgcgcgtgagcgcgcgcaagacc
ttctcctccggcagctacgagaccagcagctacatcaaggcgttcgccgccactccgctg
gaaaaggcgccgcccgcgcccagctcggtatggcgcatcggccagcgcgtgttccaccag
aagttcggcgagggcgtggtgacggacagcgaaggcggcggcaacgaaggccgcgtgcag
gtcaatttcaagcgtgccggcagcaaatggctggcactcgaatatgccaagctcaccgcc
atctga
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