KEGG   Saccharopolyspora erythraea: SACE_2439
Entry
SACE_2439         CDS       T00492                                 
Symbol
pvdS1
Name
(GenBank) RNA polymerase sigma factor, putative
  KO
K22468  polyphosphate kinase [EC:2.7.4.34]
Organism
sen  Saccharopolyspora erythraea
Pathway
sen00190  Oxidative phosphorylation
sen03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sen00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    SACE_2439 (pvdS1)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SACE_2439 (pvdS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sen03019]
    SACE_2439 (pvdS1)
Enzymes [BR:sen01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.34  GDP-polyphosphate phosphotransferase
     SACE_2439 (pvdS1)
Messenger RNA biogenesis [BR:sen03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     SACE_2439 (pvdS1)
SSDB
Motif
Pfam: PPK2
Other DBs
NCBI-ProteinID: CAM01737
Kitasato: SACE_2439
Cambridge: SACE_2439
UniProt: A4FCG2
LinkDB
Position
2645517..2646263
AA seq 248 aa
MQGELVKLQEWVRAEGVRLVVVFEGRDAAGKGSTIKRVAEYLNPRVARIVALPAPTERER
TQWYFQRYIAQLPAAGEIVLFDRSWYNRAGVEHVMGFCSDQEYRRFLVQCPVFERLLVED
GLLLRKYWFSVSRAEQLRRLSRRSEDPMRRWKLSPMDVESMVRWDEYSAARDEMLSATDI
PECPWYLVESEDKRRARINMIAHLLSTVPYYEPSRPSVELPAVPPAGSTQRPSRTRYTYV
PDHAAGLL
NT seq 747 nt   +upstreamnt  +downstreamnt
ttgcagggggagctggtgaagctgcaggaatgggtccgggccgaaggagtgcggctcgtc
gtggtgttcgagggacgcgacgcggcgggcaagggcagcacgatcaagcgggtcgcggag
tacctcaatccccgcgtggcgcggatcgtagccctgccggcgccgaccgagcgggaacgc
acgcagtggtacttccagcgctacatcgcgcagcttcccgccgcgggggagatcgtgttg
ttcgaccgcagttggtacaaccgcgcgggcgtggagcacgtcatgggcttctgcagcgat
caggagtaccggcggttcctggtgcagtgcccggtcttcgagcgcctgctcgtcgaggac
ggcctactgctgcgcaagtactggttctcggtcagccgggccgagcagctgcggaggctg
agccggcgaagcgaggatccgatgcggcggtggaagctgtcgccgatggacgtggagtcg
atggtccggtgggacgagtactcggctgcccgggacgagatgctttcggccacagatatt
ccggaatgcccgtggtacctggtggaaagcgaggacaagcggcgggcgcgcatcaacatg
atcgcgcacctgctctcgaccgtgccgtactacgagccgtcgcggccgtcggtcgagctg
cctgccgtgccgcctgccggctcgacccagcggccatcgcgcacgcgctacacctacgtc
ccggatcacgccgctgggttgttgtga

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