Saccharopolyspora erythraea: SACE_3596
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Entry
SACE_3596 CDS
T00492
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sen
Saccharopolyspora erythraea
Brite
KEGG Orthology (KO) [BR:
sen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sen03016
]
SACE_3596
Enzymes [BR:
sen01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
SACE_3596
Transfer RNA biogenesis [BR:
sen03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
SACE_3596
Prokaryotic type
tRNA splicing ligases
SACE_3596
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
YojO
Motif
Other DBs
NCBI-ProteinID:
CAM02870
Kitasato:
SACE_3596
Cambridge:
SACE_3596
UniProt:
A4FFP5
LinkDB
All DBs
Position
3959521..3960711
Genome browser
AA seq
396 aa
AA seq
DB search
MFTAVQGSRVPIRMWADPRRVEDAAMRQLRNIADLPWVHGVAVMPDVHLGKGATVGSVIA
MRDAVSPSAVGVDIGCGMSAVRTSLRAADLPDDLSGLRSRIESAVPVGFGMHTHPVDVRR
VAGTGDWDEFWRGFGDLHEGVQNRRERALAQMGSLGGGNHFIEVCLEQGGADDGRVWLML
HSGSRNIGKELAERHIEIAKGLAHNADLPDRDLAVFVAGTPQMRHYRRDLFWAQEYARRN
RAVMVSLVQRALADTVAGTRFDEPISCHHNYVAEETYDGVELLVTRKGAIRAGSGELGII
PGSMGTGSFIVRGLGNTEAFTSASHGAGRRMSRTRARKSFTARDLAEQTAGVECRKDAGV
VDEIPAAYKDIDEVIQAQTDLVEVVAHLKQVVCVKG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaccgccgtgcagggcagccgggtgcccatccgcatgtgggccgacccgcgccgg
gtcgaggacgccgccatgcgccagctgcgcaacatcgcagacctgccctgggtgcacggc
gtggcggtgatgcccgacgtgcacctgggcaagggagccacggtcggcagcgtgatcgcc
atgcgcgacgcggtctcgccgtcggcggtcggggtcgacatcggctgcgggatgagcgcg
gtgcgcacctcgttgcgcgcggccgacctgcccgacgacctctcggggctgcgttcgcgg
atcgagtcggcggtgccggtgggcttcggcatgcacacccaccccgtggacgtccgtcgc
gtggccggcaccggtgactgggacgagttctggcgcggcttcggggacctgcacgagggc
gtgcagaaccggcgggagcgggcgctggcgcagatgggcagcctcggcggcggcaaccac
ttcatcgaggtgtgcctggagcagggcggcgccgacgacgggcgggtgtggctgatgctg
cactcggggtcgcgcaacatcggcaaggagctggccgagcgccacatcgagatcgccaag
ggcctggcgcacaacgccgacctgcccgaccgggacctggcggtgttcgtggcgggcacg
ccgcagatgcgccactaccggcgggacctgttctgggcccaggagtacgcgcgccgcaac
cgcgcggtcatggtgtcgctggtgcagcgggcgctggccgacaccgtggcgggcacgcgg
ttcgacgagccgatctcctgccaccacaactacgtcgccgaggagacctacgacggcgtg
gagctgctggtcactcgcaagggcgccatccgcgcgggcagcggggagctgggcatcatc
cccgggagcatgggcaccggctcgttcatcgtgcggggactgggcaacaccgaggcgttc
acctcggcctcccacggtgccggccggcggatgtcgcgtaccagggcccgcaagtccttc
accgcgcgcgacctggccgagcagaccgccggggtggagtgccgcaaggacgccggtgtg
gtcgacgagatcccggcggcctacaaggacatcgacgaggtgatccaggcccagaccgac
ctggtggaggtcgtggcccacctcaagcaggtcgtctgcgtcaagggctga
DBGET
integrated database retrieval system
