Saccharopolyspora erythraea: SACE_3676
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Entry
SACE_3676 CDS
T00492
Symbol
alkA1
Name
(GenBank) putative ADA-like regulatory protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sen
Saccharopolyspora erythraea
Pathway
sen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SACE_3676 (alkA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sen03000
]
SACE_3676 (alkA1)
03400 DNA repair and recombination proteins [BR:
sen03400
]
SACE_3676 (alkA1)
Enzymes [BR:
sen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SACE_3676 (alkA1)
Transcription factors [BR:
sen03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SACE_3676 (alkA1)
DNA repair and recombination proteins [BR:
sen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SACE_3676 (alkA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
CAM02950
Kitasato:
SACE_3676
Cambridge:
SACE_3676
UniProt:
A4FFX5
LinkDB
All DBs
Position
4034680..4036113
Genome browser
AA seq
477 aa
AA seq
DB search
MRSRDARFDGWFFTAVLTTGIYCRPSCPVAPPKPENMRFFPTSAAAQQAGFRACKRCRPD
ASPGSPEWNQRADLVGRAMRLIADGVVDREGVPGLAARLGYSARQVERQLLAEVGAGPLA
LARAQRAQTARVLVETTALPMAEVALAAGFGSIRAFNDTVREVFAVAPSELRRRAPGAPA
PSGPLSLRLPFRAPLCPDNLFGHLAATAVPGVEEWRDGVYRRTLRLPHGHGVVALRPMPD
HIGCRLSLSDLRDLPVAINRCRRMLDLDADPAAVDELLRSDALLRELVDKNPGRRVPRTA
DSAEFAVRTVLGQQVSTAAARTLAARLVVEHGAEVADAEGGLTHLFPEPEALAAVDPATL
AFPQSRRRALLALVNALAEGQIDLDVSGDWRRARAGLAALPGIGPWSVESIAMRALGDPD
AFIATDLGVRLAARQLGLPRTPAALTARAAAWRPWRAYAVQYLWATGDHAINRLPAA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctcccgggatgcccgcttcgacgggtggttcttcaccgcggtgctgaccaccggg
atctactgcaggccgagctgtccggtggccccgcccaagccggagaacatgcggttcttc
ccgacctcggccgcggcgcagcaggccggtttccgggcgtgcaagcgctgccgtcccgac
gccagcccgggctcgccggagtggaaccagcgcgcggacctggtcgggcgggcgatgcgg
ttgatcgccgacggcgtggtggaccgggagggcgtgccgggactggccgcccggctcggc
tacagcgcccgccaggtcgagcggcagttgctggccgaggtgggggccggtcccctggcg
ctggcccgcgcgcagcgggcgcagaccgcgcgggtgctggtggagaccaccgcgctgccg
atggccgaggtggcgctggcggcgggtttcggcagcatccgcgcgttcaacgacacggtg
cgcgaggtgttcgccgtcgcgccgagcgagctgcggcgccgtgcgccgggtgcgccggcg
ccgtcgggtccgctgtcgctgcgcttgcccttccgcgcgccgttgtgcccggacaacctc
ttcgggcacctggcggcgacggcggtgccgggggtggaggagtggcgtgacggggtctac
cggcgcacgctgcgcctgccgcacggacacggcgtggtcgccctgcggccgatgcccgac
cacatcggctgccggctttcgctgagcgaccttcgggatctgccggtggcgatcaaccgg
tgccgcaggatgctggacctcgacgccgacccggcggccgtcgacgagttgctgcgctcg
gatgcgctgctgagggagctggtcgacaagaatcccggcaggcgggtgccgcgcactgcg
gattccgccgagttcgcggtgcgcacggtactgggccagcaggtctccaccgccgcggcg
cgcacgctggccgcccgcttggtggtcgagcacggcgccgaggtcgccgacgccgaaggc
gggctcacgcacctgttccccgagcccgaggcgctggcggcggtggacccggcgacgctg
gcgttcccgcagtcgcgccgccgcgcgctgctggcgctggtcaacgcgctggccgagggc
cagatcgatctcgacgtctccggcgactggcggcgggcccgcgccggtctggcggcgctg
ccgggcatcgggccctggagcgtggagtcgatcgcgatgcgcgcgctgggcgatccggac
gccttcatcgccaccgatctgggcgtgcgcctggcggcccggcagctcgggctgccgcgg
accccggcggcgctgaccgcccgcgccgcggcctggcggccgtggcgcgcctatgccgtg
cagtacctgtgggccaccggtgaccatgcgatcaaccggctgcccgcggcgtga
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