Saccharopolyspora erythraea: SACE_5686
Help
Entry
SACE_5686 CDS
T00492
Symbol
sig1
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sen
Saccharopolyspora erythraea
Brite
KEGG Orthology (KO) [BR:
sen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sen03021
]
SACE_5686 (sig1)
Transcription machinery [BR:
sen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SACE_5686 (sig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
Sigma70_ECF
HTH_Crp_2
HTH_3
KORA
HTH_31
HTH_28
HTH_AraC
GerE
PF0610-like_N
HTH_20
HTH_19
MarR
DUF7343
Phage_antitermQ
HNH_repeat
HTH_26
HTH_ParB
Trp_repressor
STIL_N
Motif
Other DBs
NCBI-ProteinID:
CAM04872
Kitasato:
SACE_5686
Cambridge:
SACE_5686
UniProt:
A4FLE7
LinkDB
All DBs
Position
6387891..6388733
Genome browser
AA seq
280 aa
AA seq
DB search
MKHADSGPAAASRNQRYDELAPLFAEFAKVERQDPRHEQLRDRLVTEHLPVAEHIARRFS
HRGESQEDLTQVATLGLINAVDRFDPGRGVDFLSYAVPTIMGEVRRHFRDTGWAVRMPRR
LQELHLSVSAAIARLSQEFGRAPTPSEIAEHLGISTNDVYHGLEAGNAYRSASLDELLTD
TDEIPLGDAIGSNDAELDEVENRETIRPLLAELEERERRILVMRFFRGMTQTQIAEQVGI
SQMHVSRLLSRTLAWLRERLETDVPDLRPGCSHEARTRQD
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcatgcggactccgggcctgccgccgcttcgcggaaccagcgctacgacgaactg
gctccgctgttcgccgagttcgcgaaggtggagcggcaggacccccgccacgagcaactg
cgcgacaggctggtgaccgagcacctgccggttgccgagcacatcgcgcgcaggttcagc
catcgtggggagtcccaggaagacctgacccaggtcgccacgctcggtctcatcaacgcc
gtggaccgcttcgaccccggccgcggcgtcgacttcctctcctacgcggtgcccaccatc
atgggcgaggtccgcaggcacttccgggacaccgggtgggcggtgcggatgccgcgcagg
ctgcaggagctgcacctgtcggtctcggcggccatcgcacggctgtcgcaggagttcggc
cgcgccccgacaccgagcgagatcgccgagcacctgggcatcagcaccaacgacgtctac
cacgggctggaggcgggcaacgcctaccgcagcgcgtcgctggacgagctgctgaccgac
accgacgagatccccctcggcgacgccatcggctccaacgacgcggagctcgacgaggtg
gagaaccgcgagaccatccgcccgctgctggctgagctggaggagcgcgagcggcgcatc
ctggtcatgcgcttcttccggggcatgacccagacgcagatcgccgaacaggtcggcatc
tcccagatgcacgtgtcgcggctgctgtcccggacgcttgcctggctgcgggagcgcctg
gagaccgacgtcccggacctgcggccgggatgctcccacgaggcccgcaccaggcaggac
tga
DBGET
integrated database retrieval system
