Saccharopolyspora erythraea: SACE_6203
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Entry
SACE_6203 CDS
T00492
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
sen
Saccharopolyspora erythraea
Brite
KEGG Orthology (KO) [BR:
sen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sen03019
]
SACE_6203 (hrpA)
Enzymes [BR:
sen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SACE_6203 (hrpA)
Messenger RNA biogenesis [BR:
sen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SACE_6203 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
APHB_HrpA
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
WHD_HA2
Acyl-CoA_dh_2
NACHT
AAA_16
nSTAND3
nSTAND_NTPase5
PhoH
AAA_25
T2SSE
ResIII
DUF6139
SLFN-g3_helicase
RsgA_GTPase
SRP54
Motif
Other DBs
NCBI-ProteinID:
CAM05376
Kitasato:
SACE_6203
Cambridge:
SACE_6203
UniProt:
A4FMV1
LinkDB
All DBs
Position
complement(6950950..6954894)
Genome browser
AA seq
1314 aa
AA seq
DB search
MGTSSVERPLGALRERLPDLMLHDQRRLRRRIEGARKIRDAQALEPVVAEISADLAAAEQ
RVQQRRGAVPEIRYPQELPVSRRREDLLAAIRDNQVVIVAGETGSGKTTQIPKMCLELGR
GVQGMIGHTQPRRLAARTVAERVAEELGTELGEAIGYQVRFTDRAGSNTLVKLMTDGILL
AEIQQDRLLRRYDTLIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSR
HFDDAPVVEVSGRTYPVEVRYRPLVDDSADEEDVERDQVQAICDAVDELGAEGPGDVLVF
LSGEREIRDTAEALQQQNLRNTEILPLYARLSAAEQHRVFQPHAGRRIVLATNVAETSLT
VPGIKYVIDPGTARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEQD
FESRPEFTDPEILRTNLASVILQMTSLGLGDIASFPFIEPPDRRQVTDGVNLLHELGAID
PAQKDVHKRLTSTGRKLAQLPVDPRLARMVLEAERNGCVRETLVIAAALSIQDPRERPAD
KQQAAGEKHARFADKESDFLSYLNLWQYLREQQRELSGNQFRKLCKAEFLNYLRVREWQD
LYAQLRQMTKSMGITPNSHPADPAHIHQSLLAGLLSHIGLKDTDKKQGPQNRGGGNEYLG
ARNAKFAVFPGSALFKKPPRWVMAAELVETSRLWARIAARVEPEWIEKLAQHLVKRSYSE
PHWEKDRAAVMAYEKVTLYGVPLVAGRKVQYGRIEPELSRELFIRHALVEGDWNTRHEFF
HANRALLEEVEDLEERARRRDILVDDQTLFDFYDQRVGAEVVSGAHFDSWWKKTRREQPD
LLNFEKSMLINQESAAVSDRDYPDAWQQGGHRLPLSYQFEPGADADGVTVHIPLQVLNQI
DPDGFDRQIPGMREELVTALIKSLPKQLRRNFVPVPDHARAALARMEPGGDLLESLEQEL
RRMTGVTVPRESWDFDRIPDHLRMTFRVVDGKGRKLAESKDLGALKQRLKPKVRAEISKA
ADEVEKSGLREWDFGELPRTFQTQRSGHAVKAYPALVDEGESVAVRIFDTEEEQREAHWR
GTRRLLLLNLPSPLKSIQRGMGGATRLVFGASPHGDVAGVLDDCLKCAVDKLIADHGGPV
WDQASFATLLGRVGSQLGSATADTVSKVERVLTARQQVDALLADRTRRLPAESMADITDQ
LSGLLHPGFVTGTGWTRLLDVVRYLKAVEQRVDKLQFHPQRDQDWMYQVFEVQDRYRDML
DAVPAGRPVPEELRQVGWMIEELRVSLFAQTLGTPHPVSLKRVHRAMDKAQKKS
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgggcacctcatctgtggaacgaccgctcggcgcgctgcgcgagcggctgccggacctg
atgctgcacgaccagcggcggctgcgccgccgcatcgagggcgcccgcaagatccgcgac
gcgcaggccctggagccggtcgtcgccgagatctccgccgacctcgccgccgccgagcag
cgcgtccagcagcgccgcggcgcggtaccggagatccgctacccgcaggagctgccggtc
agccggcgcagggaggacctgctggcggcgatccgcgacaaccaggtcgtgatcgtggcc
ggcgagaccggctcgggcaagacgacgcagatcccgaagatgtgcctggagctcgggcgc
ggtgtgcagggcatgatcggccacacccagccgcggcggctcgccgcgcgcacggtggcc
gagcgggtcgccgaggagctgggcaccgagctgggcgaggccatcggctaccaggtccgc
ttcaccgaccgcgccgggtcgaacacgctggtcaaactgatgaccgacggcatcctgctg
gccgagatccagcaggaccggctgctgcgccgctacgacacgctgatcatcgacgaggcg
cacgagcgcagtctcaacatcgacttcatcctcggctacctcaagcagctcctgccgcgc
cggcccgacctcaaggtgatcatcacctccgcgacgatcgacccggagcgcttctcgcgg
cacttcgacgacgccccggtcgtcgaggtctccgggcgcacctatccggtggaggtgcgg
taccggccgctggtcgacgactccgcggacgaagaggacgtcgagcgcgaccaggtccag
gcgatctgcgacgccgtcgacgagctcggcgccgaaggccccggcgacgtcctggtcttc
ctcagcggtgagcgggagatccgcgacaccgccgaggcgctgcagcagcagaacctgcga
aacaccgagatcctgccgctgtacgcgcggttgtcggccgccgagcagcaccgggtgttc
cagccgcacgcgggcaggcggatcgtgctggccaccaacgtcgccgagacctccctgacg
gtgccgggcatcaagtacgtcatcgacccgggcaccgcgcgcatctcgcgctacagcttc
cgcaccaaggtgcagcggctgccgatcgaaccggtgtcgcaggcatcggcgaaccagcgc
aagggccgctgcggccgggtgtcggagggcatctgcatccggctgtactccgagcaggac
ttcgagtcgcggccggagttcaccgacccggagatcctgcgcaccaacctcgcctcggtc
atcctgcagatgacctcgctgggcctcggcgacatcgcgtcgttcccgttcatcgagccg
ccggaccgcaggcaggtcaccgacggcgtgaacctgctgcacgagctcggcgccatcgac
ccggcgcaaaaggacgtgcacaagcggctgacctccaccggccgcaagctcgcgcagctg
cccgtcgacccgcggctggcgcgcatggtgctggaggccgagcgcaacggctgcgtgcgc
gagacgctggtcatcgccgccgcgctgtccatccaggacccccgcgagcggcccgccgac
aagcagcaggcggcgggggagaagcacgcgcgcttcgccgacaaggagtcggacttcctg
tcctacctgaacctgtggcagtacctgcgggagcagcagcgtgagctgtcgggcaaccag
ttccgcaagctgtgcaaggcggagttcctcaactacctgcgggtgcgggagtggcaggac
ctctacgcgcagctgcgccagatgaccaagtccatgggcatcacgccgaacagccatccc
gccgaccccgcccacatccaccagtcgctgctggcgggtctgctgtcgcacatcgggctc
aaggacaccgacaagaagcagggaccgcagaaccgcggcggcggcaacgagtacctcggc
gcgcgcaacgcgaagttcgccgtgttcccggggtcggcgctgttcaagaagccgccgcgc
tgggtgatggccgccgagctggtggagacctcgcggctgtgggcgcgcatcgccgcccgg
gtcgagcccgagtggatcgagaagctcgcgcagcacctggtcaagcgcagctacagcgag
ccgcactgggagaaggaccgggccgcggtgatggcctacgagaaggtcacgctctacggc
gtgccgctggtggccgggcgcaaggtccagtacgggcgcatcgagcccgagctgtcgcgg
gagctgttcatccggcacgccctggtcgagggcgactggaacaccaggcacgagttcttc
cacgccaaccgcgcgctgctggaggaggtcgaggacctcgaggagcgggcgcggcggcgc
gacatcctcgtcgacgaccagaccctgttcgacttctacgaccagcgggtcggcgcggag
gtcgtctccggggcgcacttcgactcgtggtggaagaagacccgccgcgagcagcccgac
ctgctcaacttcgagaagtcgatgctgatcaaccaggagtcggcggcggtcagcgaccgc
gactaccccgacgcctggcagcagggcggccaccggctgccgctctcctaccagttcgag
ccaggtgccgacgccgacggcgtcaccgtgcacatcccgctgcaggtgctcaaccagatc
gacccggacggcttcgaccgccagatccccggcatgcgggaggaactggtcaccgcgctg
atcaagtcgctgccgaagcagctgcgccgcaacttcgtccccgtccccgaccacgcccgc
gcggcgctggcccggatggagcccggcggcgacctgctggagtcgctggagcaggagctg
cggcggatgaccggcgtcacggtaccgcgcgagtcctgggacttcgaccggattcccgac
cacctgcggatgaccttccgggtcgtcgacggcaagggccgcaagctcgccgagtccaag
gacctcggcgcgctcaagcagcgcctgaaacccaaggtgcgggccgagatctccaaggcg
gccgacgaggtcgagaagtccggcctgcgcgagtgggacttcggcgagctgccgcggacc
ttccagacgcagcgatccgggcacgcggtcaaggcgtacccggcgctggtcgacgagggc
gagagcgtcgcggtgcgcatcttcgacaccgaggaggagcagcgcgaggcgcactggcgg
ggaacccggcggttgctgctgctcaacctgccctcgccgctgaagtccatccagcgcggc
atgggcggcgccacccggctggtcttcggcgcgagcccgcacggcgacgtggcaggcgtc
ctcgacgactgcctgaagtgcgcggtggacaagctgatcgccgaccacggcggtccggtc
tgggaccaggcgtccttcgcgacgttgctgggcagggtcggctcccagctcggcagcgcc
accgccgacacggtgtccaaggtggagcgggtgctgacggcacgccagcaggtcgacgcc
ctgctcgccgaccgcacgcgccgcctccccgccgagtcgatggccgacatcaccgaccag
ctctccggcctgctgcaccccggcttcgtgaccggcacggggtggacgcggctgctcgac
gtggtgcgctacctcaaggccgtcgagcagcgggtggacaagctccagttccacccgcag
cgcgaccaggactggatgtaccaggtgttcgaggtgcaggaccgctaccgggacatgctc
gacgcggtgccggcgggacggccggtgcccgaggagctgcggcaggtcgggtggatgatc
gaggagctgcgcgtgagcctgttcgcccagaccctcggcaccccgcacccggtttcgctc
aagcgcgtccaccgcgcgatggacaaggcgcagaagaagagctga
DBGET
integrated database retrieval system
