Saccharopolyspora erythraea: SACE_6853
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Entry
SACE_6853 CDS
T00492
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sen
Saccharopolyspora erythraea
Pathway
sen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SACE_6853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sen03021
]
SACE_6853
03400 DNA repair and recombination proteins [BR:
sen03400
]
SACE_6853
Enzymes [BR:
sen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SACE_6853
Transcription machinery [BR:
sen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SACE_6853
DNA repair and recombination proteins [BR:
sen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SACE_6853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
CAM06017
Kitasato:
SACE_6853
Cambridge:
SACE_6853
UniProt:
A4FPP2
LinkDB
All DBs
Position
complement(7659325..7663236)
Genome browser
AA seq
1303 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAASVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVNTEMRHNEMSTLEAEIGVERKQIADQRDADLEARAQKLEAD
LAELEQEGAKSDVRRKVKEGGEREMRQLRDRAQRELDKLDEIWETFTKLEPRQLIADELL
YRELYDRFGEYFTGGMGAESIQALLQDFDINAEADQLRETIRSGKGQKKLRALKRLKVVA
AFQATGNNPSGMVLNCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKEMAVELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYHLTRQLDGAKGEGQ
SFSSVGEAIMAFDRGGLDLQAKVKIRVRDLVPNAEQRPEDWEPGQPWLAETTLGRVWFNE
LLPEDYPFVNDLLPKKRQAAIVNDLAERYPMVTVAQTLDKLKDAGFHWATRSGVTVSISD
VVVPPNKTEILDGYEAKADQVEKRYRRGALSYQERNAELVKVWTAAKDEVAEAMEANFPE
DNSISMIVKSGAAGNMTQVVQLAGMRGLVSNPKGEYIPRPIKANFREGLSVLEYFISNHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCGTERGIRMPIAEKLPDGKLLRDAH
VETSVYARTTAEDVTDSDGNVVLARGSDLGDPAIEKLLAAGVTKVKVRSVLTCESGVGVC
AVCYGRSMATGKLVDVGEAVGIVAAQSIGEPGTQLTMRTFHQGGVAGDDITTGLPRVQEL
FEARVPKGKAPIADAPGRIRMEDNDRYWKITIIPDDGSEEIVYDKLSKRQRLAAISVDGT
ERQITDGDHVDVGQQLLEGAVDPHEVLRVMGPREAQLHLVREVQEVYRSQGVGIHDKHVE
VIVRQMLRRVIIIDSGATEFLPGSPVERSQFEGENRRVVAEGGDPASGRPVLMGITKASL
ATESWLSAASFQETTRILTNAAIEGASDKLVGLKENVIIGKLIPAGTGINRYRNIQVQPT
EEARAAAYAIPSYDDGYYTPDVFGTGTGAAVPLDDYDFGRDYR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgacgtcaacttcttcgatgaactccgcatcggcctcgccacggccgacgacatc
cgccagtggtcgtacggcgaggtcaagaagcccgaaacgatcaactaccgcaccctgaag
ccggagaaggacgggctcttctgcgagaagatcttcggtccgacccgcgactgggaatgc
tactgcggcaagtacaagcgggtgcgcttcaagggcatcatctgcgagcgctgcggtgtc
gaggtcacccgcgccaaggtgcgccgtgagcggatgggccacatcgagctcgccgcctcg
gtgacccacatctggtacttcaagggcgtcccgagccggctgggctacctgctcgacttg
gccccgaaggacctcgagaagatcatctacttcgccgcctacgtgatcacctcggtgaac
accgagatgcggcacaacgagatgtcgaccctcgaggccgagatcggtgtcgagcgcaag
cagatcgccgaccagcgcgacgcggacctcgaggcccgcgcccagaagctggaagccgac
ctggccgagctggagcaggagggcgccaagagcgacgtccgccgcaaggtcaaggagggc
ggcgagcgcgagatgcgccagctgcgcgaccgcgcgcagcgcgagctcgacaagctcgac
gagatctgggagaccttcaccaagctggagccccgccagctcatcgccgacgagctgctc
taccgcgagctctacgaccgcttcggcgagtacttcaccggcggcatgggcgcggagtcc
atccaggcgctgctgcaggacttcgacatcaacgccgaggccgaccagctgcgcgagacg
atccgctcgggcaagggccagaagaagctgcgcgcgctcaagcggctgaaggtcgtcgcg
gcgttccaggccaccggcaacaacccgagcggcatggtgctcaactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctcgacggtggccgcttcgcgacctccgacctc
aacgacctgtaccgccgggtcatcaaccgcaacaaccgcctcaagaggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtcgacgcg
ctgttcgacaacggccgtcgcgggcgtccggtgaccggcccgggcaaccggccgctgaag
tcgctgtccgacctgctcaagggcaagcagggccggttccgccagaacctgctgggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggcctgccgaaggagatggcggtcgagctgttcaagccgttcgtcatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcggatggtggagcgccagcgc
ccccaggtgtgggacgtgctggaagaggtcatcgccgagcacccggtgctgctcaaccgt
gctccgacgctgcaccgcctgggcatccaggccttcgagccgcagctggtcgagggcaag
gcgatccagctgcacccgctggtctgcgaggccttcaacgccgacttcgacggtgaccag
atggcggtgcacctgccgctgtcggccgaggcgcaggccgaggcccgcatcctgatgctg
tccagcaacaacatcctgtcgccggcctccggccggccgctggcgatgccgcgtctggac
atggtcaccggcctgtaccacctgacccgtcagctggacggcgccaagggcgagggccag
tccttctcctcggtcggcgaggcgatcatggccttcgaccgcggcgggctggacctgcag
gccaaggtcaagatccgggtccgcgacctggtgcccaacgccgagcagcgcccggaggac
tgggagcccggtcagccctggctggccgagacgaccctgggccgggtgtggttcaacgaa
ctgctgcccgaggactacccgttcgtcaacgacctgctgccgaagaagcggcaggcggcg
atcgtcaacgacctcgccgagcggtacccgatggtcaccgtcgcccagacgctggacaag
ctcaaggacgccggtttccactgggccacccgttccggtgtgaccgtgtcgatctccgac
gtggtcgtgccgccgaacaagaccgagatcctcgacggctacgaggccaaggccgaccag
gtcgagaagcgctaccgccgcggtgcgctgtcgtaccaggagcgcaacgccgagctggtc
aaggtctggacggcggccaaggacgaggtcgccgaggccatggaggcgaacttccccgag
gacaactcgatcagcatgatcgtcaagtccggggccgccggtaacatgacccaggtcgtc
cagctggccggtatgcgtggtctggtgtcgaacccgaagggtgagtacatcccgcgcccg
atcaaggcgaacttccgcgagggcctgtcggtgctggagtacttcatctccaaccacggt
gcccgcaagggtctggccgacaccgcgctgcggaccgccgactcgggttacctgacccgt
cgtctggtggacgtctcgcaggacgtcatcgtccgcgagaccgactgcggcaccgagcgc
ggcatccggatgccgatcgcggagaagctgcccgacggcaagctgctgcgcgacgcgcac
gtggagaccagcgtctacgcccggaccaccgccgaggacgtcaccgactccgacggcaac
gtggtgctggcccgcggttcggacctgggcgacccggcgatcgagaagctgctcgccgcc
ggtgtcaccaaggtcaaggtccgcagcgtcctgacctgcgagtccggcgtcggcgtctgc
gcggtctgctacggccgttcgatggccaccggcaagctggtggacgtcggcgaggccgtc
ggcatcgtcgccgcccagtcgatcggtgagccgggcacgcagctgacgatgcgtaccttc
caccagggcggtgtcgccggtgacgacatcaccaccggtctgccgcgtgtgcaggagctg
ttcgaagcccgggtcccgaagggcaaggcgccgatcgccgacgcccccggccggatccgg
atggaggacaacgaccggtactggaagatcacgatcatcccggacgacggcagcgaggag
atcgtctacgacaagctgtccaagcggcagcggctcgcggcgatctcggtcgacggcacc
gagcggcagatcaccgacggcgaccacgtcgacgtcggccagcagttgctggaaggtgcg
gtcgacccgcacgaggtgctgcgggtcatgggcccccgcgaggcgcagctccacctggtc
cgcgaggtccaggaggtctaccgctcgcagggtgtgggcatccacgacaagcacgtcgag
gtgatcgtccggcagatgctgcggcgggtcatcatcatcgactccggtgcgaccgagttc
ctgcccggctcgccggtcgagcgctcgcagttcgagggcgagaaccggcgcgtggtggcc
gagggcggcgacccggcgtccggccgtccggtgctgatgggcatcaccaaggcgtcgctg
gccaccgagtcgtggctgtcggcggcctccttccaggagacgaccaggatcctcaccaac
gccgcgatcgagggcgcgagcgacaagctggtcggcctgaaggagaacgtgatcatcggc
aagctgatcccggccggtacgggcatcaaccgctaccgcaacatccaggtgcagccgacg
gaggaggcgcgggccgcggcctacgcgatcccgtcctacgacgacggctactacaccccg
gatgtcttcggtaccggcaccggtgccgcggttccgctggacgactacgacttcggccgc
gactaccgctga
DBGET
integrated database retrieval system
