Salmonella enterica subsp. enterica serovar Enteritidis EC20090135: AU38_00960
Help
Entry
AU38_00960 CDS
T03731
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sena
Salmonella enterica subsp. enterica serovar Enteritidis EC20090135
Brite
KEGG Orthology (KO) [BR:
sena00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sena03016
]
AU38_00960
Enzymes [BR:
sena01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AU38_00960
Transfer RNA biogenesis [BR:
sena03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AU38_00960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHP68203
LinkDB
All DBs
Position
complement(219527..220057)
Genome browser
AA seq
176 aa
AA seq
DB search
MSEPKRLFFAIDLPDDARAQIIAWRAAHFASEDGRPVAAANLHLTLAFLGDVSSDKQRAL
AQLAGRIRQPGFTLHLDDAGQWLRSRVVWLGMRQPPRGLLQLANMLRAQAARSGCYQSPQ
PFHPHITLLRDASHTVAIPPPGFCWSFPVTSFALYASSYGQGRTRYAELQRWTLGE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccaaaacggctgttttttgcgattgacttacccgacgacgcgcgcgcacaa
attatcgcctggcgcgccgcccattttgcgtctgaagacggacgccccgtcgcagcggcg
aacctacacctgacgctggcctttttaggcgacgtcagtagcgataagcagcgcgcgctt
gcgcaactggccggacgaattcgccagccgggctttacgctacatctggatgacgccggt
cagtggctgcgttcgcgcgtggtgtggctggggatgcgccagccgccgcgcgggttgttg
cagttggctaatatgctgcgcgcgcaggccgcccgcagcggttgttaccaaagcccgcag
ccttttcacccgcatattacgctgctgcgcgacgccagccatacggtggctatcccgccg
ccgggcttttgctggtcatttccggtcacgtcgtttgcgctttacgcctcttcgtatggg
caaggccgtacccgctatgccgagctgcagcgctggacgctgggcgaataa
DBGET
integrated database retrieval system
