Salmonella enterica subsp. enterica serovar Bovismorbificans: BN855_11440
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Entry
BN855_11440 CDS
T02827
Name
(GenBank) ribonuclease, Rne/Rng family protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
senb
Salmonella enterica subsp. enterica serovar Bovismorbificans
Pathway
senb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
senb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN855_11440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
senb03019
]
BN855_11440
03009 Ribosome biogenesis [BR:
senb03009
]
BN855_11440
Enzymes [BR:
senb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BN855_11440
Messenger RNA biogenesis [BR:
senb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN855_11440
Ribosome biogenesis [BR:
senb03009
]
Prokaryotic type
rRNA processing factors
BN855_11440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
Motif
Other DBs
NCBI-ProteinID:
CDF53320
LinkDB
All DBs
Position
complement(1170408..1173602)
Genome browser
AA seq
1064 aa
AA seq
DB search
MLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAE
RHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLA
GSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWD
LSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVMEMARQH
IAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAID
INSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRL
REAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSI
LRLIEEEALKENTQEVHAIVPVPIASYLLNEKRTAVNAIETRQDGVRCVIVPNDQMETPH
YSVLRVRKGEETPTLSYMLPKLHEEAMALPSEEEYAERKRPEQPALATFAMPDVPPAPTP
VEPAVSVATAKKDNVAAAQPAQPGLFSRFLNALKQLFSGEETKAVETAAPKAEEKAERQQ
DRRKPRQNNRRDRNERRDTRDNRAGRDGGESRDDNRRNRRQAQQQNAETRDTRQQETAEK
VKTGDEQQQTPRRERSRRRNDDKRQAQQEVKALNREEQPVQETEQEERVQQVQPRRKQRQ
LNQKVRFTNSAVVETVDTPVVVDEPRPVENVEQPVPAPRTELAKVDLPVVADIAPEQDDS
VEPRDNTGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPEMASGKVWIR
YPIVRPQETQVVEEQREADLALPQPVVAEQQVIAATVALEPQASVQAVENVAVEPQTVAE
PQTSEVVEVETTHPEVIAAPVDEQPQLIAESDTPEAQEVIADAEPVAETADASITVAENV
ADVVVVEPEEETKAEAAVVEHTAEETVIAPAQVVEKPQDVVCVDDHNHASAPMTRAPAPE
YVPETPHHSDWQRPSFHFEGKGAAGGHSATRHASAPATRPQPVE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcaacgcgactcagcaggaagagttgcgcgtcgcccttgtagatgggcagcgt
ctgtacgatctggatatagaaagccccggacacgagcagaaaaaagcgaacatctataaa
ggcaaaattacccgtattgaaccgagcctggaagcggcttttgttgattacggcgcagaa
cgccacggtttcctcccgttaaaagaaattgcccgcgaatatttccccgctaactacagc
gctcatggtcgcccgaacattaaagacgtgttacgcgaaggccaggaagtcattgttcaa
atcgataaagaagagcgcggcaacaaaggcgcggcgttaaccacctttatcagtctggcg
ggcagctacctggtactgatgccgaataacccgcgcgcgggtggtatttcccgtcgcatt
gaaggcgacgatcgtaccgagttaaaagaagcgttggccagcctggaacttcctgaaggg
atggggcttatcgtgcgtaccgcgggcgtgggtaaatccgccgaagcgttgcagtgggat
ttaagcttccgcctgaaacactgggaggccattcagaaagccgctgaaagccgtcccgcg
ccgttcctgatccatcaggaaagcaacgtcatcgtacgcgcgtttcgcgactatctgcgt
caggatatcggtgaaatcctgatcgacaatccaaaagtgatggaaatggcgcgtcagcat
atcgccgcgttgggccgcccggattttagcagcaaaattaagctgtacaccggtgaaatc
ccgttgttcagccattaccagatcgaatcgcagatcgagtcagcgttccagcgtgaagtg
cgcctgccctccggcggctccatcgtcattgacagtaccgaagcgttaaccgccatcgat
atcaactccgcccgcgcgactcgcggcggcgatatcgaagaaacggcgtttaataccaac
ctggaagcggccgatgagattgcccgccagttgcgtctgcgcgacctgggcggcctgatc
gttatcgactttatcgatatgacgccggtacgtcaccagcgcgcggtagaaaaccgtctg
cgtgaagcggtacgtcaggaccgggcgcgtattcagattagccatatttcccgcttcggc
ctgctcgaaatgtctcgtcagcgcctgagcccgtcgctgggcgaatccagccatcacgtg
tgtccgcgctgtagcggtaccggcaccgtgcgcgataacgaatctctgtcgctgtccatt
ctgcgcctgattgaagaagaagcgctgaaagagaatacgcaggaagtccatgccattgtt
ccggtgccgatcgcctcttatctgcttaacgaaaaacggacggcagtgaacgctattgag
acgcgtcaggatggcgtccgctgtgtcatcgtcccgaacgatcagatggaaacgccgcac
tattccgtgctgcgcgtacgcaaaggggaagaaacgccgaccctgagctacatgctgccg
aaactgcacgaagaagcgatggcgctgccttctgaagaagagtacgccgagcgtaaacgc
ccggaacagcctgcgctggcgacattcgctatgccagatgtgcctccggcgccgacgcct
gtcgaaccggcggttagcgtcgccacggcgaaaaaggataatgttgccgccgcgcagcct
gcccagccgggtctgtttagccgcttccttaacgcgctgaaacaactgttcagtggtgaa
gaaacgaaagccgtcgaaacagccgcgccgaaagcggaagaaaaagcggagcgtcagcag
gatcgtcgcaagccacggcagaacaaccgtcgcgatcgtaacgaacgccgcgacacccgt
gataaccgtgccggacgtgacggcggcgagagccgcgacgataatcgtcgtaaccgtcgc
caggcgcagcagcaaaatgcggaaacgcgcgacacccgccagcaggaaacggcggaaaaa
gtgaaaaccggcgatgagcagcaacagacgccgcgtcgcgaacgcagccgccgccgcaat
gatgacaagcgccaggcgcagcaggaagtaaaagcgcttaaccgcgaagaacagcctgtc
caggagaccgagcaggaagaacgcgttcagcaggttcagccgcgccgcaagcagcgtcag
cttaatcagaaagtccgctttaccaacagcgcagtggttgaaacggttgacacgccggtc
gtcgtcgacgaaccacgcccggttgaaaacgttgaacagcccgttccagcgccgcgtacc
gagctggcgaaagttgatttacctgtcgtcgccgatatcgcgccggagcaggatgatagc
gtagaacctcgcgataataccggtatgccgcgtcgctcccgccgttctccgcgccacctg
cgcgtaagcggtcagcgtcgccgtcgctatcgtgacgagcgctacccgacacaatcgccg
atgccgttaaccgtcgcctgcgcgtcgccggaaatggcgtccggtaaagtctggatccgc
tacccgattgtccgtcctcaggaaacgcaggttgttgaagagcagcgtgaagcagatctg
gcgctgccacaaccggttgtcgctgaacagcaggttatcgctgcgaccgtagcgctcgaa
ccacaagcgtcagtacaggcggtagaaaacgttgccgttgagccgcaaaccgtcgccgaa
ccacagacgtcggaagtcgtcgaggtcgagacaacgcatccggaagtcattgccgcgcca
gttgatgaacagccgcaactgattgccgaaagcgatacgccggaagcgcaagaggttatt
gctgacgccgaaccggtagcagaaaccgccgacgcgtccattacggtggctgaaaacgta
gctgatgttgtcgttgtcgagccagaagaagagacaaaagcggaagcggctgttgtggag
cacacggcagaagaaaccgttatcgcaccggcccaggtggtggaaaaaccgcaggacgtt
gtctgcgttgacgatcataaccacgccagcgcgccgatgacgcgtgcgccagcgccggaa
tatgtgccggaaaccccgcaccatagcgactggcagcgcccttccttccactttgaaggt
aaaggcgcagcaggcggacacagcgccacacgtcacgccagcgccccggcgacacgccca
cagccggtagaatga
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