Salmonella enterica subsp. enterica serovar Bovismorbificans: BN855_30540
Help
Entry
BN855_30540 CDS
T02827
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
senb
Salmonella enterica subsp. enterica serovar Bovismorbificans
Pathway
senb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BN855_30540 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senb03400
]
BN855_30540 (recB)
Enzymes [BR:
senb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BN855_30540 (recB)
DNA repair and recombination proteins [BR:
senb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN855_30540 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CDF55234
LinkDB
All DBs
Position
complement(3033954..3037139)
Genome browser
AA seq
1061 aa
AA seq
DB search
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
QVVFDVWKGPKALLKDIDRYLQGEAPVIKAPPSQEETLASRHEQILARINQVKQQWCEAV
SELDALIESSGIDRRKFNRGNQAKWIEKITAWAQEETKNYQLPEALGKFSQRFLAERTKA
GGVTPQHPLFVAIDNLLGEPLSIKDLVLTRALSEIRETVAQEKRRRGELGFDDMLSRLDT
ALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRHQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNSVNKLFSQMNDAFMFRDIPFSPVKF
APRNQSLQFKVNDAPQPAMTLWLMEGESCGSGDYQSYMAQVCATQIRDWLRAGQTGDALL
TNGDSSRPVRASDISVLVRSRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVL
QAVMAPERENTLRSALATSMMGLTALDIETLNNDENAWDAVVEEFDGYRQIWHKRGVMPM
LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLAQHILEPDS
NASSQQLRLESDKHLVQIVTIHKSKGLEYPLVWLPFITHFRVQDQAFYHDRHSYEAVLDL
SHAEESIALAEAERLAEDLRLLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGR
LLQKGEPMDAAGLRACIEALCDEDIVCRTPGNTDNDRWQIAAASHAELSARALQRLLYDS
WRVTSYSGLQQRGHSVAQDLIPRLDIDAAGVGEAAEAPAMTPHHFPRGASPGTFLHSLFE
ELDFTQPIDPQWVQEKLELSGFETRWEPVLTRWLDTVLHVPLNETGVSLSVLTEREKQVE
MEFYLPIAQPLTAGELDALIRRYDPLSAGCPALDFMQVRGMLKGFIDLVFRYEGRYYLLD
YKSNWLGEDSAAYTQTAMAAAMQAHRYDLQYQLYTLALHRYLRHRMANYDYERHFGGVIY
LFLRGVDSERPQQGIFTTRPAAALINQLDDMFAGEMSEEAQ
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggccgcggtttttaccatccacggtttttgccagcgtatgctcagcctgaac
gctttcgaatccggtatgttgtttgagcaacagcttattgaagacgaatctttgttgcgt
tatcaggcctgcgccgatttctggcggcgtcattgctatccgctgccgcgcgacatcgcg
caggtggtgtttgacgtgtggaagggaccgaaggcgctcttaaaggatatcgatcgttat
ctgcagggcgaagcgccggtcattaaagcgccgccatcgcaggaggagacgctggcatcg
cgtcatgaacagatcctggcgcgcatcaaccaggtgaagcagcagtggtgtgaggcggtt
agcgagctggacgcgctgatcgaatcatccggcatcgatcgcagaaagttcaaccgcggc
aatcaggcgaaatggatcgaaaagatcaccgcgtgggcgcaagaagagacgaaaaactat
caattacccgaggcgttgggaaaattttcacagcgttttttagctgagcgcaccaaagct
ggcggcgtgacgccccagcacccattgtttgtcgccattgataacctgttgggcgaaccg
ctatcgattaaagatctggttcttacccgagcgctatcagagatccgtgaaacggtggct
caggaaaaacgccggcgcggcgagctggggtttgacgatatgctcagccgtttagatacc
gcgctgcgtagtgaaagcggcgaggcgctggctgcggcgattcgtacccgttttccggtg
gcgatgatcgatgaatttcaggataccgacccacaacagtaccgtatttttcgccgtatc
tggcgacatcaacccgatacggcgctattgctgattggcgatcctaaacaggcgatttat
gcgtttcgtggcgcggatatcttcacctacatgaaggctcgcagcgaagtgagcgcgcac
tatacgcttgacactaactggcgctccgcgccggggatggtgaatagcgttaacaagctg
ttcagtcagatgaacgacgcctttatgttccgcgatattcccttcagtccggtaaagttt
gcgcccagaaaccagtcgctgcaatttaaagtgaatgacgcgcctcaaccggcgatgacc
ctgtggctaatggagggggaaagctgcggttcgggcgattatcaaagttatatggcgcag
gtgtgcgccacgcaaattcgcgactggctgcgtgccgggcaaacgggcgacgcgctgctg
acgaacggcgattcgtcgcggcccgttcgtgcctcggatatcagcgtgctggtgcgcagc
aggcgggaagccgcgctgatacgggatgcgctgaccttactggcgatcccctccgtctat
ctttctaaccgcgacagcgtattcgaaacgctcgaagcgcaggagatgctgtgggtgttg
caggcggtgatggcgcccgaacgtgagaatacgctgcgtagcgctttggcgacatcaatg
atgggccttaccgcgctggatatcgaaacgcttaacaatgatgaaaatgcgtgggatgcg
gttgtcgaagagtttgatggctaccgacagatttggcataaacgcggcgtgatgcctatg
ctgcgcgcgctaatgtcggcgcgcaatattgctgaaaacctgctggcgacggcgggaggc
gaacgtcggctgacggatattttgcatattagcgagctgttacaggaagccggttcgcag
ctggaaagcgaacatgcgctggtgcgttggctggcgcagcatatccttgaacccgatagc
aatgcttccagccagcaactacgtctggaaagcgataagcatctggtgcaaatcgtcacc
attcataaatcgaaaggtctggaatacccgctggtctggttaccttttatcacccatttc
cgcgtgcaggaccaggctttttatcacgacaggcactcctacgaggcggtgctggacctt
agtcacgccgaagagagcatagcactggcggaagccgaacgcctggcggaagacctgcgc
ctactttatgtcgcgctgacccgtgcagtgtggcattgcagcctcggcgtcgcgccgctg
gtgcggcgtcgcagtgataagaaaggcgagacggatgtgcaccaaagcgcgcttgggcga
ctcctgcaaaaaggcgaaccgatggatgccgcaggccttcgcgcctgtattgaggcgcta
tgcgacgaggatatcgtgtgtcgaacgccaggcaacacggataacgaccgctggcaaatt
gccgctgcatcgcatgcggaactcagcgccagagcgctgcaacgcctgctttatgatagc
tggcgcgtcaccagttattccggtttgcagcagcggggacatagcgtggcgcaagatctt
attcctcgtctcgacattgacgccgcaggcgttggcgaagcggcggaagcgccggcaatg
acgccgcatcactttcctcgcggggcatcgccgggaacatttttgcacagcctgtttgaa
gagcttgattttactcaaccgatagacccccaatgggtacaggaaaaactggagctgagt
ggttttgaaacgcgatgggagcccgtacttacccgctggctggacaccgtgttgcacgtt
ccccttaacgagacgggcgttagtctgagcgtgctgaccgagcgtgaaaaacaggtcgaa
atggagttttatctgccgattgcccagccgcttaccgccggagagctggatgcgttgatt
cgtcgatacgacccgctttcagcaggttgtcctgcgctggatttcatgcaggttcgcggc
atgttaaagggctttatcgacctggtgttccgttatgaagggcgctattacctgctcgac
tataaatctaactggctgggcgaggatagcgccgcttatacccagacggcgatggctgcg
gcgatgcaggcgcatcgctatgatttgcagtaccagctttatacgctggcattgcaccgt
taccttcgtcatcgaatggcgaattacgactatgaacgccatttcggcggcgtcatctat
ctctttttacgcggggtggatagcgaacgtccgcagcagggtatttttaccactcgtcct
gcggcggcgttaattaaccaactggatgatatgtttgcaggtgaaatgagtgaggaggcg
caatga
DBGET
integrated database retrieval system
