Salmonella enterica subsp. enterica serovar Bovismorbificans: BN855_6970
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Entry
BN855_6970 CDS
T02827
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase (photoreactivation)
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
senb
Salmonella enterica subsp. enterica serovar Bovismorbificans
Brite
KEGG Orthology (KO) [BR:
senb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senb03400
]
BN855_6970 (phrB)
Enzymes [BR:
senb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BN855_6970 (phrB)
DNA repair and recombination proteins [BR:
senb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BN855_6970 (phrB)
Prokaryotic type
BN855_6970 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CDF52873
LinkDB
All DBs
Position
730981..732402
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AA seq
473 aa
AA seq
DB search
MPTHLVWFRRDLRLQDNLALAAACRDASARVLALYISTPAQWQAHDMAPRQAAFISAQLN
ALQTALAEKGIPLLFHEVADFNASIETVKNVCRQHDVSHLFYNYQYEFNERQRDAAVEKT
LPSVICEGFDDSVILAPGAVMTGNHEMYKVFTPFKNAWLKRLKEDIPPCVPAPKIRVSGA
LSTPLTPVSLNYPQQAFDAALFPVEENAVIAQLRQFCAQGADEYALRRDFPAVDGTSRLS
ASLATGGLSPRQCLHRLLAEQPQALDGGPGSVWLNELIWREFYRHLMTWYPALCKHQPFI
RWTKRVAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDRDGEFIRQW
LPALRDIPGKAIHEPWRWAEKAGVVLDYPRPIVEHKQARIATLSAYEAARKGA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccatttagtctggttcaggcgcgatctgcgtttacaggataaccttgcgctg
gccgccgcctgccgcgatgcatccgcgcgggtgctggcgctttatatttccacccccgcg
cagtggcaggcccatgatatggcgccgcggcaggcggcattcatcagcgcgcagctcaat
gcgctacagacggcccttgcagagaaaggcattccgttgctgtttcatgaagtggcggat
tttaacgccagtattgagacggttaaaaacgtttgccggcagcatgacgtcagccatctg
ttttataactatcagtatgagtttaacgagcgtcagcgtgatgcggcggtggaaaaaacg
ctgccctctgtcatctgcgaaggctttgacgatagcgtgattctggcgcccggcgcggtg
atgaccggcaatcatgaaatgtataaagtttttacgccgtttaaaaatgcctggttgaaa
cggctaaaagaagatatcccgccgtgcgttccggccccgaagatccgggtgagcggcgcg
ctttctacacccttaacgccagtctcgcttaactacccgcaacaggcgtttgacgccgcg
cttttcccggtggaagaaaacgcggtcatcgcgcagctacgtcagttttgcgcgcagggc
gcagacgagtatgcgttacggcgcgatttccctgcggttgacggcaccagtcggctttcc
gccagcctggcgacgggcggcctgtcgccgcgacagtgcctgcaccgattactggcggag
cagccgcaggcgctggacggcgggccgggaagcgtctggttgaatgagctcatctggcgg
gaattttaccgtcatttaatgacctggtatccggcattatgcaaacaccagccgtttatc
cgctggacaaaacgcgtcgcgtggcaggaaaacccgcactattttcaggcatggcagaaa
ggcgaaaccggttatcccattgtcgatgcggcgatgcgccagcttaacgcgacgggctgg
atgcataaccgtttacgcatgattaccgccagctttctggtaaaagatctgttgattgac
tggcggttgggggagcgctatttcatgtcgcagcttattgacggcgatcttgccgccaat
aatggcggctggcagtgggccgcctcaaccggtactgacgccgcgccttattttcgtatt
tttaatcccacgactcagggagagaggttcgatcgcgacggcgaatttatccgccagtgg
ctaccggcattacgcgatatccctggaaaagcgattcacgagccgtggcggtgggcggaa
aaagcgggagtcgtgcttgattatcctcggcctattgtggagcacaaacaggcgagaatc
gcaacgctttccgcctatgaggcggcgagaaaaggggcgtga
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integrated database retrieval system
