Salmonella enterica subsp. enterica serovar Tennessee: SEET0819_11065
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Entry
SEET0819_11065 CDS
T03730
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
senc
Salmonella enterica subsp. enterica serovar Tennessee
Pathway
senc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
senc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SEET0819_11065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
senc03019
]
SEET0819_11065
Enzymes [BR:
senc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SEET0819_11065
Messenger RNA biogenesis [BR:
senc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SEET0819_11065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AHN79711
LinkDB
All DBs
Position
2359699..2361066
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AA seq
455 aa
AA seq
DB search
MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRITTPGYEPDPSIKAEPIQNGRQQRGGGGGGRGRGQNQGGAGRSQQPRRQD
SGAAKAKPKPRTGEEKPAGDKARPPRRPRRITPAQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctgggattaaaccctgatatcctgcgcgctattgccgagcagggt
taccgtgaacctacccctattcagcaacaggcgattcccgccgtgctggaaggccgcgat
ctgatggccagcgcccagaccggaaccggtaaaacggcgggttttaccctgccattgttg
cagcatctgattacccatcagccgcatgctaaaggtcgtcgcccggtgcgtgcgttgatc
ctcacgccaacccgcgagctggcggcgcaaattggcgaaaacgtcagagattacagtaaa
tatctcaatattcgctcgctggtggtatttggcggcgtaagcatcaatccgcagatgatg
aaactgcgcggcggcgtggatgtgctggtggcgacgccgggacgtctgctcgacctggaa
catcaaaatgccgtgaagctggatcagattgagattctggtactggatgaagccgaccgt
atgctggatatgggcttcattcatgacattcgtcgcgtgctggcgaaactgccggcgaag
cgtcagaatctgctgttctccgccacgttctccgacgacatcaaagcgcttgccgaaaag
ctgttgcgcaacccgctggaaatcgaagtggcgcgccgcaacacggcctcagagcaggta
acgcagcacgtgcactttgtcgataaaaaacgcaaacgtgaactgttgtcgcagatgatt
ggccagggcaactggcagcaggtgttggtcttcacccgcacaaagcatggcgcgaaccat
ctggcggaacagcttaataaagacggtattcgcagcgcggcgatccacggtaataaatcg
cagggcgcacgtacccgcgcgctggccgattttaaatccggcgatattcgcgtgctggtg
gcgacggatattgcggcgcgtggtctggatattgaagagctgccgcacgtggtcaactat
gagctgccgaacgtgccggaagattatgtacaccgtattggccgtaccggtcgcgcggcg
gcaactggcgaggcgctgtcgctggtctgtgttgacgagcataaattgttgcgtgatatc
gaaaagttgctgaaaaaagagatcccacgcattacgacgccgggctatgagccggacccg
tcgattaaagcggagccgattcagaacggtcgtcagcagcgcggcggcggtggcggcggt
cgtggacgtggacaaaatcaggggggagcggggcgcagtcagcagccgcgacgtcaggat
agcggggcggcgaaggcgaaaccaaaaccgcgcacaggcgaggagaaacccgcgggcgac
aaagcacgtccgccgcgtcgcccgcgcagaatcacgcctgcccagtaa
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