Salmonella enterica subsp. enterica serovar Tennessee: SEET0819_14905
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Entry
SEET0819_14905 CDS
T03730
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
senc
Salmonella enterica subsp. enterica serovar Tennessee
Brite
KEGG Orthology (KO) [BR:
senc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
senc03019
]
SEET0819_14905
Enzymes [BR:
senc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SEET0819_14905
Messenger RNA biogenesis [BR:
senc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SEET0819_14905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_19
AAA_22
T2SSE
nSTAND3
nSTAND_NTPase5
NACHT
PhoH
AAA_16
SLFN-g3_helicase
ResIII
DUF6145
Motif
Other DBs
NCBI-ProteinID:
AHN80442
LinkDB
All DBs
Position
complement(3134566..3138468)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQSMLTLQVLQQRLDALMLRDKQRFSRRLHGVKKVKNPDAQQAIFQTMAKEIEQAATQ
VALREAARPSITYPQNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG
IKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMTDGILLA
EIQQDRLLMQYDTLIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGE
REIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADEQ
QTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE
HKSRRRDILVDDDTLFEFYDQRISHGVISARHFDSWWKKISRETPDLLNFEKSMLIKEGA
EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTVDREDW
HWDQVPEHLKITFRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIW
SFGELPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHEK
VRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDD
VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQITA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatctatgttgacgcttcaggtgttacagcagcggctggatgcactgatg
ctgcgcgacaaacagcgcttttcgcgccgcctgcatggcgtaaagaaagtaaaaaatcct
gatgcgcaacaggccattttccagacgatggcgaaagaaattgaacaggctgcgacgcag
gtcgctctccgcgaagcggcgcgtccctcaatcacttatccgcaaaatctgcctgttagc
cagaagaaacaggacattctggaagcgatccgcgatcatcaggtggtgatcgtagcaggg
gaaaccggttccggtaaaaccacccagttgccgaaaatttgtatggagctgggacgcgga
attaaaggacttattggacatactcagccgcgtcgcctggcggcgcgcaccgtcgctaac
cgcattgccgaagagttgcaaacggagccaggcggctgcatcggctataaagttcgtttc
agcgatcatgtcagtagcaacaccatggtcaaactgatgacggacggtatcctgctggcg
gaaatccagcaggacaggctattgatgcagtatgacaccctcattattgatgaagcgcat
gaacgcagcctgaatattgacttcttgctcggctatctgaaagagcttctgccgcgtcgc
cccgatctgaaagtgattattacctctgcgaccatcgacccggaacgcttctcgcgccac
tttaataacgcgccgattatcgaagtatctggccgaacgtatcccgtagaagttcgttat
cgccccattgtggaagaggctgacgacactgaacgcgatcagctacaggcaattttcgac
gctgttgatgaactggggcgtgaaagtcccggcgatattctgatttttatgagcggagag
cgggaaatccgcgataccgccgacgccctgaacaagctgaacttacggcataccgaagtg
ttgccgctgtatgcacgcttgtcgaacagcgaacagaaccgcgttttccagtcgcacagc
ggacgccgtatcgtgctggcgactaacgtggcggaaacgtcgctgacggtgccgggtatc
aagtatgtgatcgatcctggcactgcgcgcatcagccgctatagctaccgcactaaagtg
cagcgcctgccgattgaaccgatctcacaggcttccgccaaccagcgtaaagggcgttgc
gggcgcgtatcggaagggatttgcattcgtctgtattcggaagatgactttttgtcacgt
ccggaatttaccgacccggaaattctacgtaccaacctggcgtcggttattttgcagatg
accgccctggggctgggtgacatcgccgccttcccgtttgtcgaagcgccggataagcgc
aatattcaggatggcgtacgtttgttggaagagctgggggcgattaccgccgacgaacag
caaacggcatataagctgacgccgctgggccgacaattatcccagttgccggtcgacccg
cgcctggcgcgtatggttctggaagcgcaaaagcatggctgtgtgcgcgaagcgatgatc
attacttccgcactctctattcaggatccgcgcgagcgcccagtggataagcagcaggct
tccgatgagaaacaccggcgtttccatgataaggagtccgattttctggcgtttgttaac
ctgtggaattacctcggcgagcaacaaaaggccctgtcgtcgaatcaattccgccggctg
tgtcgcaccgactatctgaactatttacgcgtgcgtgagtggcaggatatctatacccaa
ctgcgtcaggtggtaaaagaactggggattccggtaaacagcgaacccgcagaataccgg
gaaattcacgttgcgctgttaacggggctgttgtcgcatatcgggatgaaagatgccgat
aaacaagagtacaccggcgcgcgtaacgcccgattctctattttccccggttccggttta
ttcaaaaaaccgccgaaatggacaatggtcgccgagctggtggaaaccagccgcctgtgg
gggcgcatcgctgcccgcattgagccagaatgggtggaaccggtagcccagcacctgatt
aaacgttcatatagcgaaccgcactgggagcgggcgcaaggcgcggtgatggcgacggaa
aaggttactgtctacggtctgccgattgttgccgcgcgcaaggtgaattacagccagatt
gacccggcgttgtgtcgcgagttgtttatccgccatgcgctggtggagggggactggcaa
acccgtcacgccttcttccgtgagaatctaaaattgcgtgcggaagtcgaggaacttgag
cacaaatctcgccgccgcgatatcctggtggatgacgataccctgtttgagttttatgac
cagcgtattagccatggcgttatttccgcccgccactttgatagttggtggaaaaaaatc
agccgcgagacgccggatctgctcaactttgaaaaaagtatgctgattaaagaaggcgcg
gaaaaaatcagcaaactggattacccgaacttctggcaccagggcaatcttaagctgcgt
ttgagctatcagtttgaaccgggcgcggatgctgacggcgtgaccgtccatattccgttg
ccgctacttaaccaggttgacgagagcggttttgaatggcagatcccagggctgcgccgt
gaattagttattgcgctgattaaatcgttgccaaaaccggtacgtcgcaactttgttccg
gcgccaaactatgctgaagcttttttaggtcgcgtaacgccgctggagctgccgctgctg
gacgctctggagcgtgaactgcgccggatgaccggcgtcacggtcgatcgggaagactgg
cattgggatcaggtgcccgagcatctgaaaatcacgtttcgcgtggtgaatgacaaaaac
aagaaactgcaggaagggcgttcgctcgccgagcttaaaaatgcgctgaaaggtaaagtg
caggagacgctctcggcggtagcggatgacggcattgagcagagcgggctgcatatctgg
agtttcggcgagctgccggaaagctacgaacagaaacgcggtaattataaagtgaaggcg
tggccggcgttagtggatgaacgtgacagcgtcgctatcaaattgtttgataatccgctg
gaacaacaacaggcgatgtggtgcggcttacgccgtctgttgttgctcaatattccttca
ccaattaagtatctgcatgagaaattgccgaataaagccaagctgggactgtactttaac
ccgtacggcaaagtgctggagttgattgatgactgtatcgcctgcggggtagataagctg
atagatgccaacggcggaccggtgtggagcgaagcaggtttcaccgcgctgcacgaaaag
gtacgcgccgagctgaatgatactgtggtggatatcgcgaagcaggttgagcgcatcctg
acgaccgtattcaatatcaataaacgtctgaaagggcgggtggatatgagcatggcgttg
gggctttccgatatcaaggcgcagatgagcggtcttgtataccgtggttttgtgactggc
aacggctttaaacgtctcggcgatacgctgcgttatctgcaggcaattgaaaagcggctg
gagaaactggctgtcgatccgcaccgcgatcgggcgcaaatgctgaaagtcgaaagcgtc
cagcaggcgtggcaacaatggataaataaactgcctccagcgcgtcgcgaagatgatgat
gttaaagagatccgttggatgattgaagaactgcgtgtcagttatttcgcccaacagctc
ggtacgccttatcctatttccgataagcgtattttacaggccatggatcagattacggcc
taa
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