Salmonella enterica subsp. enterica serovar Tennessee: SEET0819_20400
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Entry
SEET0819_20400 CDS
T03730
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
senc
Salmonella enterica subsp. enterica serovar Tennessee
Brite
KEGG Orthology (KO) [BR:
senc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
senc03009
]
SEET0819_20400
Enzymes [BR:
senc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SEET0819_20400
Ribosome biogenesis [BR:
senc03009
]
Prokaryotic type
rRNA helicases
SEET0819_20400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
DUF561
Motif
Other DBs
NCBI-ProteinID:
AHN81475
LinkDB
All DBs
Position
4243821..4245155
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AA seq
444 aa
AA seq
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MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSANPSTRERKKIHQWYYRADNFEHKVALLK
HLLKQDDATRSIVFVRKRERVHELAETLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
LKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAEKKKEKEKEKPRVKKRH
RDTKNIGKRRKPSGTKMQEQSSEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggatgccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcatatctgctg
ccggcgttgcagcacctgctcgactttccgcgtaaaaaatcggggccgccgcgcattctg
atcctgacgccaacccgcgaactggcaatgcaggttgccgatcacgctcgtgaactggct
aagcatactcatctggatatcgccacgattaccggcggcgtggcctatatgaaccatgct
gaagtgtttagcgaaaaccaggatatcgtggtcgccacgacgggccgtctgctgcaatat
ataaaagaagagaactttgactgccgggcggttgaaacactgatccttgacgaagctgac
cggatgctcgacatgggcttcgctcaggacattgaacatatcgctggtgagacccgctgg
cgtaaacagacgatgctgttctccgccacgctggaaggcgatgcgattaaagattttgcc
gagcgtctgctggaagacccggttgaggtttccgccaatccgtcaacccgcgagcgtaag
aaaattcaccagtggtactaccgtgccgacaatttcgaacataaagttgcgctgttgaag
cacctgctaaaacaagacgatgcaacccgttctatcgtatttgtacgtaaacgtgaacgc
gtccatgaactggctgaaacgctgcgtctggcagggatcaacaattgctatcttgaaggc
gagatggcgcagatcaaacgtaacgaaggtattaagcgtctcaccgacggtcgcgttaac
gtgctggtcgcgaccgacgtcgcggcacgcgggattgatattcctgacgtcagccacgtt
attaacttcgacatgccgcgcagtggcgatacctatctgcatcgcattggtcgtacaggc
cgtgcgggccgcaaaggcactgcaatctcgctggtagaagcccacgaccatctgttgctg
ctgaaaatcggtcgctacatcgaagagccgctaaaagcgcgcgtcattgatgagcttcgc
ccgaccacgcgtgcgcccagcgaaaagctgaccggcaaaccgtcgaaaaaagtgctggcg
aaacgcgccgagaagaaaaaagagaaagaaaaagagaagccgcgcgtgaagaaacgtcac
cgcgatacaaaaaatatcggtaagcgccgcaagccaagcggtacgaaaatgcaggagcaa
tccagcgaagagtga
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