KEGG   Salmonella enterica subsp. enterica serovar Typhimurium DT104: DT104_10581
Entry
DT104_10581       CDS       T02874                                 
Symbol
helD
Name
(GenBank) helicase IV (75 kD helicase)
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
send  Salmonella enterica subsp. enterica serovar Typhimurium DT104
Brite
KEGG Orthology (KO) [BR:send00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:send03400]
    DT104_10581 (helD)
Enzymes [BR:send01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DT104_10581 (helD)
DNA repair and recombination proteins [BR:send03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DT104_10581 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 DEAD
Other DBs
NCBI-ProteinID: CCW73770
LinkDB
Position
1147394..1149448
AA seq 684 aa
MELKATSLGKRLAQHPYDRAEILNAGVKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV
LPEDKVVRLHGTEWSETQQFHRYLDAHWRRWSQEMSDVAAQALQEQWARISERTGGNQWL
TRERVRGLEHEIRQTFAALPLPVSRLEEFAHCREIWRKCLAWLQDSEGSRQQHNQAYADA
MLEAHADFFTQIESSPLNPSQARAVVNGESSLLVLAGAGSGKTSVLVARAGWLLARGQAD
AGQILLLAFGRKAAEEMDERIRERLHTEEITARTFHSLALYIIQQGSKKAPVVSKLESDA
TARHQLFLRTWRQQCSEKKAQAKGWRQWLEEEMQWVVPEGNFWDDETLQRRLAPRLDRWV
SLMRMHGGAQAEMIAGAPEECRELFGKRIKLMAPLLKAWKSALKAENAVDFSGLIHQAMV
ILEKGRFISPWKHILVDEFQDISPQRAALLEALRKQNSQTTLFAVGDDWQAIYRFSGAQL
SLTTAFHQTFGEGEHCHLDTTYRFNSRIGDIANRFVQQNPHQLKKPLNSLTPGDKKAVTL
LDESQLDALLDKLSGYAKEDERILVLARYHHLKPASLQKAATRWPKLQIDFMTIHASKGQ
QADYVILVGLQEGNDGFPAPARESIMESALLPQVEDFPDAEERRLLYVALTRARARVWLL
FNKDNPSRFVEALKQLDVPVARKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactgaaagcaacttctcttggaaaacgtctggcgcaacacccgtatgatcgtgcc
gagatcctcaacgctggggtgaaagtgtctggcgacaggcatgaatatcttattccattc
aatcagttattggcgattcactgtaagcgtgggctggtatggggcgagctggagtttgtc
ctgccggaggataaagtcgtgcgtttgcacggtaccgagtggtcggaaacccagcaattc
catcgctatctggacgcgcactggcgtcgctggagccaggagatgagtgatgtcgccgcg
caggcattacaggagcaatgggcgcgtattagtgagcgaacgggcggaaaccaatggctt
acccgtgaacgcgttcgggggctggaacacgaaattcgccagacgtttgccgccttgccg
ctgccggtctcacgtctggaggagtttgctcactgtcgcgagatatggcgtaagtgtctg
gcatggttacaggatagcgagggtagtcggcagcagcataatcaggcgtatgctgatgcc
atgctggaagcgcatgccgacttttttacgcagatagaatcctctccgcttaatccttcc
caggccagggcggtggttaacggcgaatcatcgttactggtactggcgggcgcgggaagc
ggtaagacctcggtgctggtggcgcgcgcgggttggctgttggcgcgcggacaagccgat
gcggggcaaattcttttactggcgtttggtcgcaaggcggcagaagagatggatgagcgt
atccgcgagcgcttacatacggaagagattactgcccgtacgttccattcgctggcgctg
tatattattcagcaaggcagtaaaaaagcgccggttgtcagtaagctggaaagtgacgcc
accgcgcggcatcagctatttctgcgcacctggcgtcagcagtgtagcgagaaaaaagcg
caggccaaaggctggcgtcagtggctggaagaggagatgcagtgggtagtgccggaaggt
aatttctgggacgatgagacattgcagcggcgtctggcccctcgcctggatcgttgggtc
agtttgatgcgtatgcacggcggcgcgcaggcagaaatgatcgctggcgcgccagaggag
tgccgcgagctgtttggcaaacgcattaagctgatggcgccgctgctaaaggcctggaaa
agcgcgttgaaagcggaaaatgccgttgatttctccgggctgatccatcaggcaatggtg
atcctcgaaaaagggcgttttatcagcccgtggaagcatattctggtcgatgaatttcag
gatatttccccgcagcgggcggcgctgttagaggcgctgcgcaagcagaatagccagact
acgctgtttgccgttggcgatgactggcaggcgatttaccgttttagcggggcgcagctc
tccttaacgacggcgtttcatcagacgttcggcgagggcgagcattgccacctggacacc
acgtaccgctttaacagtcggattggcgatattgccaatcgctttgtacagcagaatccg
caccagcttaaaaaaccgttaaatagtctgaccccaggcgataaaaaagcggtgacgtta
ttggatgaaagccagttggacgcgttactggataaattatccggctatgcgaaggaagat
gaacgtatcctggtgctggcgcgctatcaccatctgaaacccgcgagtctacaaaaagcg
gcgactcgctggccgaagttacagatagacttcatgactatccatgccagcaaaggccaa
caggccgattacgtgattcttgtcggattgcaggagggtaacgacggtttccccgccccg
gcgcgagaatccattatggaaagtgcgcttcttcctcaggttgaggattttccggacgct
gaagagcggcgtttgttatatgtggcgttgacgcgcgcgcgtgcgcgggtctggctgctt
tttaataaagataatccctcgcgctttgtggaggcgcttaaacagctggatgtgccggtg
gcgaggaagccctaa

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