Salmonella enterica subsp. enterica serovar Typhimurium DT104: DT104_20941
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Entry
DT104_20941 CDS
T02874
Symbol
pocR
Name
(GenBank) pdu/cob regulatory protein PocR
KO
K27259
AraC family transcriptional regulator, pdu and cob operon regulator
Organism
send
Salmonella enterica subsp. enterica serovar Typhimurium DT104
Brite
KEGG Orthology (KO) [BR:
send00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
send03000
]
DT104_20941 (pocR)
Transcription factors [BR:
send03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DT104_20941 (pocR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PocR
HTH_AraC
HTH_18
Motif
Other DBs
NCBI-ProteinID:
CCW74799
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Position
complement(2181342..2182253)
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AA seq
303 aa
AA seq
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MISASALNSELINKIAQDFAQATGLAVVVVNIHGDEISELFNFTPFCQLMRQHPQHSTRC
RMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDVELVNIL
NVDDRWQADPELLNEFRNVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPQQSEA
NKTTRGPTPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAW
VNRQRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQINENSHP
PSL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgcgagcgctctgaactcagaactcattaataaaatcgcacaggattttgca
caagccaccggtctggcggttgtggttgtcaatattcatggtgatgaaatatctgagcta
ttcaatttcacgccgttttgtcagttgatgcggcagcatccccagcatagtacacgttgt
cgtatgagcgatcgctgcgggggactggaggcatcgaagtccgatcaaccctgtatttat
cgttgtcatgccggtctaacggatttttctattccgctggtaatcgcagggcatttagtt
ggctttgttttatgcgggcaggttcgtttaagtaatgacgtggagctggtaaacattctt
aatgttgacgatcgctggcaggctgaccctgagctcttgaatgaatttcggaatgtgcca
gagatggactattcacgcgttatcgcttccgccgatcttcttaaactgattgttgagaat
tgcctgaaaaaacagctcaatttcgtggttatcaaagacaatccgcagcaatcggaggca
aataaaaccactcgtggtcccactccgcatgacagtaaaatgaaaaaagcgcttcgctat
attgatgcgcatttgtccgacgatcttcgtcttgaggatgtcgcctcacatgtctatctc
agcccctattacttcagtaagctattcaagaaatatcagggaatcggatttaatgcgtgg
gtaaaccgccagagaatggttagcgccagagaattgctttgccatagtgactggagtatt
gccagtattgcgcgtaatttaggcttttcgcaaaccagctatttttgcaaagtcttccgc
cagacctatcaggttacgccgcaggcttatcgccagcagataaatgagaattctcatcct
ccatcgttatga
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